The simplest thing to do, if you just need to make a picture, is to >set cartoon_color, grey
Cheers, Gian On 12/2/14 12:09 PM, Anasuya Dighe wrote: > Hi everyone, > > I want to color C-alpha atoms of a selection in a specified colour (red) and > and the cartoon representation in a separate color(grey). When i try colouring > the calpha's in red, the same color leaks onto to the cartoon representation > also, making it look grey with patches of red. > > Haven't been able to figure out why. I want to see just the spheres as red > and > the rest of the cartoon as a continuous grey color. > These are the commands that I am using in PyMOL. > > PyMOL>load 4EHC.pdb > PyMOL>hide lines > PyMOL>show cartoon > PyMOL>color grey > Executive: Colored 2304 atoms. > PyMOL>select x, name CA and resi 194+236+251 > Selector: selection "x" defined with 3 atoms. > PyMOL>color red, x > Executive: Colored 3 atoms. > PyMOL>show spheres, x > > > Please tell me what setting should I change to get over this problem. > > Thanks > > - Anasuya > > -- Gianluca Santoni, Dynamop Group Institut de Biologie Structurale 71 avenue des martyrs 38044 Grenoble Cedex 9 France _________________________________________________________ Please avoid sending me Word or PowerPoint attachments. See http://www.gnu.org/philosophy/no-word-attachments.html ------------------------------------------------------------------------------ Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration & more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751&iu=/4140/ostg.clktrk _______________________________________________ PyMOL-users mailing list ([email protected]) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/[email protected]
