Thanks ! still have not found solution for grid-mode display: 1- I need to show names of each opened object near its cartoon
2- I need to increase spacing of grid border (m.b like just empty space)- to better discriminate between opened objects in case of its high zooming J 2015-04-11 14:51 GMT+02:00 João M. Damas <jmda...@itqb.unl.pt>: > 1- See http://www.pymolwiki.org/index.php/Ray_Trace_Gain. However, from my > experience, I don't think the setting works too well, so what I usually do > is to increase the resolution of the raytrace, which makes the black outline > thinner. > > On Fri, Apr 10, 2015 at 4:48 PM, James Starlight <jmsstarli...@gmail.com> > wrote: >> >> Dear Pymol users! >> >> Here I will ask some question regarding visualization issues in pymol. >> >> 1- Using ray_trace_mode, 1 I need to decrease at least twisty width of >> black countour line (especially in the loop segments). >> >> 2- Being in the split mode (visualization of the several objects on >> one screen) I need to show title of each of the objects somewhere near >> of its cartoon area (e,g in right upper corner)- just to know on the >> produced picture names of the corresponded cartoon. >> >> 3- Also please have a look on my another topic regarding visualization >> of B-factor gradients: actually I need to revert its existing color >> pattern and select residues according to it's actual B-factor values >> (E.g with B-factor=0, with negative and/or positive) for its >> subsequent selective visualization. >> >> Thanks a lot for the advises! >> >> >> ------------------------------------------------------------------------------ >> BPM Camp - Free Virtual Workshop May 6th at 10am PDT/1PM EDT >> Develop your own process in accordance with the BPMN 2 standard >> Learn Process modeling best practices with Bonita BPM through live >> exercises >> http://www.bonitasoft.com/be-part-of-it/events/bpm-camp-virtual- >> event?utm_ >> source=Sourceforge_BPM_Camp_5_6_15&utm_medium=email&utm_campaign=VA_SF >> _______________________________________________ >> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) >> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users >> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > > > > > -- > João M. Damas > PhD Student > Protein Modelling Group > ITQB-UNL, Oeiras, Portugal > Tel:+351-214469613 ------------------------------------------------------------------------------ BPM Camp - Free Virtual Workshop May 6th at 10am PDT/1PM EDT Develop your own process in accordance with the BPMN 2 standard Learn Process modeling best practices with Bonita BPM through live exercises http://www.bonitasoft.com/be-part-of-it/events/bpm-camp-virtual- event?utm_ source=Sourceforge_BPM_Camp_5_6_15&utm_medium=email&utm_campaign=VA_SF _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
