I guess I should chime in here. JSmol does read (some fraction of) PyMOL session files. To be sure it has not been a priority to keep up to date with all the amazing PyMOL capabilities, but certainly as a proof of concept it has worked well, and it would be great to collaborate on this to improve it more. See, for example: http://noys3.weizmann.ac.il/a2jb/browse
I certainly don't claim to know anything about JyMOL, except I guess it uses JNLP. Does Chrome support JNLP anymore? Bob Hanson
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