Dear Spencer
Thank you for the suggestion. Well, I actually wanted to do it as a part of
making a movie, so would have liked some automation.
Thank you.
Best Regards
Priyan
On Thu, Jan 28, 2016 at 2:39 PM, Spencer Bliven <spencer.bli...@gmail.com>
wrote:
> Priyan–
>
> You can use the split_states <http://pymolwiki.org/index.php/Split_states>
> command to divide it into multiple objects, then run the script on each
> state individually.
>
> -Spencer
>
> On Thu, Jan 28, 2016 at 3:45 AM, ccp4 pymol <ccp4.py...@gmail.com> wrote:
>
>> Hi
>>
>> I have a multi-state object loaded in PyMOL which represents transition
>> of a domain from one orientation to the other. I tried using
>> "show_bumps.py" to bring up clashes during the transition but the cgo that
>> is written out shows clashes only for the first state. Am I doing something
>> wrong or should we pass additional commands to show clashes for all states.
>> Kindly post your replies with help/suggestions in this regard.
>>
>> Thank you
>>
>> Best Regards
>> Priyan
>>
>>
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