Hi Tony, It's possible, but not out of the box. I wrote a script for this some time ago which uses biopython and emboss. If you're using Linux or MacOS, everything is prepackaged for you in Anaconda Cloud. For installation instructions and examples, see: https://pymolwiki.org/index.php/Load_aln
Cheers, Thomas > On Jan 11, 2018, at 11:40 AM, Tony Lewis <tonyele...@gmail.com> wrote: > > Dear PyMOL people, > > Please can anyone tell me whether there's an easy way to use an alignment of > the residues in the displayed structures (say, from a FASTA file) to align > the residues shown in the sequence display? > > I would find this a very powerful feature. > > Many thanks for any help. > > Tony Lewis -- Thomas Holder PyMOL Principal Developer Schrödinger, Inc. ------------------------------------------------------------------------------ Check out the vibrant tech community on one of the world's most engaging tech sites, Slashdot.org! http://sdm.link/slashdot _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
