Hi Arnaud,

I can reproduce both issues, at least with "sticks" representation. Apparently 
PyMOL is missing pick color invalidation somewhere.

As a workaround, click the "Rebuild" button (upper right button box), or type 
the "rebuild" command. After that, picking should be correct again.

Cheers,
  Thomas

> On Jun 13, 2019, at 4:21 PM, Arnaud Basle <arnaud.ba...@ncl.ac.uk> wrote:
> 
> Dear All,
> 
> We found that our home compiled version has the problem just even doing:
> 
> load a pdb
> 
> change the colour
> 
> and then the mouse coordinates are wrong... Anyone else?
> 
> Cheers,
> 
> Arnaud
> 
> 
> On 13/06/2019 14:33, Arnaud Basle wrote:
>> Dear All,
>> 
>> We may have found a bug where pymol does not get the correct mouse location 
>> on the screen.
>> 
>> We are using Version 2.3.0a0 on linux Mint 19 (~ubuntu).
>> 
>> Maybe people can try to reproduce the bug:
>> 
>> open a pdb file
>> 
>> display sticks
>> 
>> try to select residues or recenter and it should work fine.
>> 
>> Now, reduce the top part window of pymol with the log output, movie buttons 
>> and command line (the mouse pointer will change then click and drag).
>> 
>> repeat selecting/centering and it should work.
>> 
>> Then use a menu entry, for example Display>Background>White
>> 
>> And if not only us now it seems we click on a residue but another one is 
>> selected. It looks like there is a bug where pymol cannot determine the 
>> correct mouse co-ordinates?
>> 
>> Cheers,
>> 
>> Arnaud
>> 
>> 
> -- 
> Dr Arnaud Basle                     X-ray facilities manager
> Newcastle Structural Biology Laboratory
> University of Newcastle
> Medical School
> ICAMB
> Framlington place
> NE2 4HH Newcastle upon tyne
> Phone 0191 208 8931
> 
> 
> 
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--
Thomas Holder
PyMOL Principal Developer
Schrödinger, Inc.



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