Dear Pymol Users!
Is it possible to visualize protein-ligand interactions (which
normally is achieved in GUI via a - > present -> ligand sites
using some combination of the pymol commands, which could be scripted
using cmd. syntax ?
I've found this explanation
https://pymolwiki.org/index.php/Displaying_Biochemical_Properties#Hydrogen_bonds_and_Polar_Contacts
but did not understand quite well how it works.
I would be grateful for the example of the commands which show the
polar contacts (I am mostly interested in hydrogen bonds) in my pymol
session without calling each time the GUI menu.
Many thanks in advance!
Enrico


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