New submission from Tibor Kiss <[email protected]>:
With the latest release Numpy is not shipped with pypy, it needs to be
installed separately. The blog post suggests two ways to compile numpy,
both method fails under Mac OS X 10.8.5 with pypy-2.2 with:
AttributeError: 'module' object has no attribute 'get_makefile_filename'
Build log is attached to the ticket.
----------
files: numpy_build_failure_with_pypy-2.2-osx64.txt
messages: 6335
nosy: pypy-issue, tki
priority: bug
release: 2.2
status: unread
title: Numpy compilation fails with pypy-2.2-osx64
________________________________________
PyPy bug tracker <[email protected]>
<https://bugs.pypy.org/issue1636>
________________________________________
xxx@yyy:/private/tmp/numpy % /opt/pypy-2.2-osx64/bin/pypy setup.py install
Running from numpy source directory.
non-existing path in 'numpy/distutils': 'site.cfg'
F2PY Version 2
blas_opt_info:
blas_mkl_info:
libraries mkl,vml,guide not found in ['/usr/local/lib', '/usr/lib',
'/opt/local/lib']
NOT AVAILABLE
openblas_info:
libraries openblas not found in ['/usr/local/lib', '/usr/lib',
'/opt/local/lib']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
Setting PTATLAS=ATLAS
customize Gnu95FCompiler
Found executable /usr/local/bin/gfortran
Setting PTATLAS=ATLAS
FOUND:
libraries = ['atlas', 'ptf77blas', 'ptcblas']
library_dirs = ['/usr/lib', '/opt/local/lib']
define_macros = [('NO_ATLAS_INFO', -1)]
language = c
include_dirs = ['/opt/local/include']
FOUND:
libraries = ['atlas', 'ptf77blas', 'ptcblas']
library_dirs = ['/usr/lib', '/opt/local/lib']
language = c
define_macros = [('NO_ATLAS_INFO', -1)]
include_dirs = ['/opt/local/include']
non-existing path in 'numpy/lib': 'benchmarks'
lapack_opt_info:
lapack_mkl_info:
mkl_info:
libraries mkl,vml,guide not found in ['/usr/local/lib', '/usr/lib',
'/opt/local/lib']
NOT AVAILABLE
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib
libraries lapack_atlas not found in /usr/local/lib
libraries ptf77blas,ptcblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib
libraries lapack_atlas not found in /opt/local/lib
numpy.distutils.system_info.atlas_threads_info
Setting PTATLAS=ATLAS
customize Gnu95FCompiler
Setting PTATLAS=ATLAS
FOUND:
libraries = ['lapack', 'ptf77blas', 'ptcblas', 'atlas']
library_dirs = ['/opt/local/lib']
define_macros = [('NO_ATLAS_INFO', -1)]
language = f77
include_dirs = ['/opt/local/include']
FOUND:
libraries = ['lapack', 'ptf77blas', 'ptcblas', 'atlas']
library_dirs = ['/opt/local/lib']
language = f77
define_macros = [('NO_ATLAS_INFO', -1)]
include_dirs = ['/opt/local/include']
/opt/pypy-2.2-osx64/lib-python/2.7/distutils/dist.py:267: UserWarning: Unknown
distribution option: 'define_macros'
warnings.warn(msg)
running install
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler
options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler
options
running build_src
build_src
building py_modules sources
building library "npymath" sources
customize Gnu95FCompiler
Traceback (most recent call last):
File "app_main.py", line 72, in run_toplevel
File "setup.py", line 192, in <module>
setup_package()
File "setup.py", line 185, in setup_package
configuration=configuration )
File "/private/tmp/numpy/numpy/distutils/core.py", line 169, in setup
return old_setup(**new_attr)
File "/opt/pypy-2.2-osx64/lib-python/2.7/distutils/core.py", line 152, in
setup
dist.run_commands()
File "/opt/pypy-2.2-osx64/lib-python/2.7/distutils/dist.py", line 953, in
run_commands
self.run_command(cmd)
File "/opt/pypy-2.2-osx64/lib-python/2.7/distutils/dist.py", line 972, in
run_command
cmd_obj.run()
File "/private/tmp/numpy/numpy/distutils/command/install.py", line 57, in run
r = old_install.run(self)
File "/opt/pypy-2.2-osx64/lib-python/2.7/distutils/command/install.py", line
573, in run
self.run_command('build')
File "/opt/pypy-2.2-osx64/lib-python/2.7/distutils/cmd.py", line 326, in
run_command
self.distribution.run_command(command)
File "/opt/pypy-2.2-osx64/lib-python/2.7/distutils/dist.py", line 972, in
run_command
cmd_obj.run()
File "/private/tmp/numpy/numpy/distutils/command/build.py", line 39, in run
old_build.run(self)
File "/opt/pypy-2.2-osx64/lib-python/2.7/distutils/command/build.py", line
127, in run
self.run_command(cmd_name)
File "/opt/pypy-2.2-osx64/lib-python/2.7/distutils/cmd.py", line 326, in
run_command
self.distribution.run_command(command)
File "/opt/pypy-2.2-osx64/lib-python/2.7/distutils/dist.py", line 972, in
run_command
cmd_obj.run()
File "/private/tmp/numpy/numpy/distutils/command/build_src.py", line 153, in
run
self.build_sources()
File "/private/tmp/numpy/numpy/distutils/command/build_src.py", line 164, in
build_sources
self.build_library_sources(*libname_info)
File "/private/tmp/numpy/numpy/distutils/command/build_src.py", line 299, in
build_library_sources
sources = self.generate_sources(sources, (lib_name, build_info))
File "/private/tmp/numpy/numpy/distutils/command/build_src.py", line 386, in
generate_sources
source = func(extension, build_dir)
File "numpy/core/setup.py", line 672, in get_mathlib_info
st = config_cmd.try_link('int main(void) { return 0;}')
File "/opt/pypy-2.2-osx64/lib-python/2.7/distutils/command/config.py", line
248, in try_link
self._check_compiler()
File "/private/tmp/numpy/numpy/distutils/command/config.py", line 76, in
_check_compiler
c_compiler=self.compiler)
File "/private/tmp/numpy/numpy/distutils/fcompiler/__init__.py", line 841, in
new_fcompiler
c_compiler=c_compiler)
File "/private/tmp/numpy/numpy/distutils/fcompiler/__init__.py", line 816, in
get_default_fcompiler
c_compiler=c_compiler)
File "/private/tmp/numpy/numpy/distutils/fcompiler/__init__.py", line 765, in
_find_existing_fcompiler
c.customize(dist)
File "/private/tmp/numpy/numpy/distutils/fcompiler/__init__.py", line 521, in
customize
linker_so_flags = self.flag_vars.linker_so
File "/private/tmp/numpy/numpy/distutils/environment.py", line 39, in
__getattr__
return self._get_var(name, conf_desc)
File "/private/tmp/numpy/numpy/distutils/environment.py", line 53, in _get_var
var = self._hook_handler(name, hook)
File "/private/tmp/numpy/numpy/distutils/fcompiler/__init__.py", line 700, in
_environment_hook
return hook()
File "/private/tmp/numpy/numpy/distutils/fcompiler/gnu.py", line 295, in
get_flags_linker_so
flags = GnuFCompiler.get_flags_linker_so(self)
File "/private/tmp/numpy/numpy/distutils/fcompiler/gnu.py", line 122, in
get_flags_linker_so
filename = sc.get_makefile_filename()
AttributeError: 'module' object has no attribute 'get_makefile_filename'
zsh: exit 1 /opt/pypy-2.2-osx64/bin/pypy setup.py install_______________________________________________
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