Yes, that was it, thanks a lot ! :-)

Le jeu. 26 mars 2020 à 03:00, Patrick <patrick.tapp...@gmail.com> a écrit :

> Hi,
>
> I think you want to disable the (default) autoLevels when setting your
> image data:
> http://www.pyqtgraph.org/documentation/graphicsItems/imageitem.html#pyqtgraph.ImageItem.setImage
> So just something like
> my_imageItem.setImage(data, levels=(0, 100), lut=lut)
> should do it, changing the levels to whatever limits of your integer data
> are.
>
> On Wednesday, 25 March 2020 22:49:04 UTC+10:30, Manu wrote:
>>
>> Hello,
>>
>> I am displaying an image of integers, a so-called label map. Each integer
>> corresponds to a different class and should have its own color. It works
>> fine when the image does not change. However in my application, the label
>> map changes and new integer values are added. When this happens, the color
>> assigned to already existing integer values change. I want them to stay the
>> same.
>>
>> What happens in practice: in current label map, '1' corresponds to blue.
>> When I add the new value '2' : '1' changes to red, and '2' adopts blue. I
>> want '1' to keep its initial color blue, and '2' to adopt a new color.
>>
>> Any idea?
>>
>> If it helps, here is how I create the lookuptable (I use a method found
>> in this group to convert from matplotlib):
>>
>> colormap = matplotlib.cm.get_cmap('CMRmap')
>> colormap._init()
>> lut = (colormap._lut * 255).view(np.ndarray)
>> # edit alpha channel so that '0'->transparent
>> alpha = np.ones(lut.shape[0]) * 255
>> alpha[0] = 0
>> lut[:,3] = alpha
>>
>> my_imageItem.setLookupTable(lut)
>>
>>
>> Best,
>> Manu
>>
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