I am trying to install pytables 1.2.3 and am having problems
with lzo and ucl
I have installed numarray-1.5.1, numeric 24.2, lzo2.02 and
ucl-1.03 (the latter two with the usual configure, make,
make install)
I installed lzo under /usr but ucl under /usr/local
in /usr/lib, I have
liblzo2.a liblzo2.la liblzo2.so liblzo2.so.2
liblzo2.so.2.0.0
in /usr/include, I have
lzo1.h lzo1a.h lzo1b.h lzo1c.h lzo1f.h lzo1x.h
lzo1y.h lzo1z.h lzo2a.h lzo_asm.h lzoconf.h lzodefs.h
lzoutil.h
in /usr/local/lib, I have
libucl.a libucl.la
in /usr/local/include/ucl, I have
ucl.h ucl_asm.h uclconf.h
I am running Suse 9.0 and python 2.4.1
Trying to install pytables, I get the following
# python setup.py install
* Found numarray 1.5.1 package installed.
* Found HDF5 headers at ``/usr/local/include``, library at
``/usr/local/lib``.
* Found LZO 2 headers at ``/usr/include``, library at
``/usr/lib``.
* Skipping detection of LZO 1 since LZO 2 has already been
found.
* Found UCL headers at ``/usr/include``, library at
``/usr/lib``.
.. WARNING:: Could not find the UCL runtime.
The UCL shared library was *not* found in the default
library
paths. In case of runtime problems, please remember to
install it.
* Found bzip2 headers at ``/usr/include``, library at
``/usr/lib``.
python test_all.py
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
PyTables version: 1.2.3
HDF5 version: 1.6.5
numarray version: 1.5.1
Zlib version: 1.1.4
UCL version: 1.03 (Jul 20 2004)
BZIP2 version: 1.0.2 (30-Dec-2001)
Python version: 2.4.1 (#5, Sep 6 2005, 15:09:29)
[GCC 3.3.1 (SuSE Linux)]
Platform: linux2-i686
Byte-ordering: little
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Performing only a light (yet comprehensive) subset of the test
suite. If you have a big system and lots of CPU to waste
and want to
do a more complete test, try passing the --heavy flag to
this script.
The whole suite will take more than 10 minutes to complete on a
relatively modern CPU and around 100 MB of main memory.
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
Numeric (version 24.2) is present. Adding the Numeric test
suite.
Scientific.IO.NetCDF not found. Skipping HDF5 <--> NetCDF
conversion tests.
-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
/usr/lib/python2.4/site-packages/tables/Leaf.py:98:
UserWarning: lzo compression library is not available. Using
zlib instead!.
warnings.warn( \
.......bunch of
dots.............................................
----------------------------------------------------------------------
Ran 2246 tests in 132.042s
OK
---------
I have tried various ways to specify the location of lzo but
that hasn't worked.
Any advice would be appreciated
Ken Dere
--
_______________________
Ken Dere
Research Professor of Solar Physics
MS 5C3
School of Computational Sciences
George Mason University
4400 University Drive
Fairfax VA 22030
703-993-4555
703-993-1993 (FAX)
[EMAIL PROTECTED]
begin:vcard
fn:Ken Dere
n:Dere;Ken
org:George Mason University;School of Computational Sciences
adr:;;4400 University Dr.;Fairfax;VA;22030;USA
email;internet:[EMAIL PROTECTED]
title:MS 5C3
tel;work:703-993-4555
tel;fax:703-993-1993
x-mozilla-html:FALSE
version:2.1
end:vcard
