Martin v. Löwis added the comment:

I fail to see the problem. HAVE_CHROOT (e.g.) is indeed generic, but so
on purpose. If some other package also defines HAVE_CHROOT, but in a
different way, then the problem is not that the names of the defines are
identical, but that the values are different, hinting at a problem
elsewhere (either Python's or that other package's autoconf must have
computed the value incorrectly).

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<http://bugs.python.org/issue771479>
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