Janto Dreijer wrote: > I'm looking for code that will calculate the running median of a > sequence, efficiently. (I'm trying to subtract the running median from > a signal to correct for gradual drift). > > My naive attempt (taking the median of a sliding window) is > unfortunately too slow as my sliding windows are quite large (~1k) and > so are my sequences (~50k). On my PC it takes about 18 seconds per > sequence. 17 of those seconds is spent in sorting the sliding windows. > > I've googled around and it looks like there are some recent journal > articles on it, but no code. Any suggestions?
If you aren't using numpy, try that. Showing your code might also be a good idea... Peter -- http://mail.python.org/mailman/listinfo/python-list