On 13/03/12 16:02, ferreirafm wrote:
> Hi James, thank you for your replay. Indeed, the problem is qsub. And as
> warned by Robert, I don't have functions properly, but just scripts.
>
>
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It looks like you're not calling wait() on your subprocesses: you're
effectively launching a bunch of processes, then not waiting for them to
finish before you ask the next process to operate on the same file.
If you haven't given it a good look-over already, the subprocess
documentation [1] is worth taking a little time over.
[1]: http://docs.python.org/library/subprocess.html#popen-objects
James
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