I believe this is fixed in the qemu git mainline (but not yet in any release)
by the following commits:

 commit c52ab08aee6f7d4717fc6b517174043126bd302f
 Author: Doug Evans <d...@google.com>
 Date:   Tue Dec 6 23:06:30 2016 +0000

     target-i386: Fix eflags.TF/#DB handling of syscall/sysret insns

     The syscall and sysret instructions behave a bit differently:
     TF is checked after the instruction completes.
     This allows the o/s to disable #DB at a syscall by adding TF to FMASK.
     And then when the sysret is executed the #DB is taken "as if" the
     syscall insn just completed.

 commit 410e98146ffde201ab4c778823ac8beaa74c4c3f
 Author: Doug Evans <d...@google.com>
 Date:   Sat Dec 24 20:29:33 2016 +0000

     target/i386: Fix bad patch application to translate.c

     In commit c52ab08aee6f7d4717fc6b517174043126bd302f,
     the patch snippet for the "syscall" insn got applied to "iret".

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https://bugs.launchpad.net/bugs/1645355

Title:
  x86: singlestepping through SYSCALL instruction causes exception in
  kernelspace

Status in QEMU:
  New

Bug description:
  Hi,

  The bug was originally reported [1] and [2] here. There is a problem
  inside QEMU with singlestepping from userspace until SYSCALL
  instruction is reached. The OS has in FMASK TF bit set, therefore
  there should be no singlestepping exception when transitioning to
  kernelmode. But, inside QEMU there is (TF is clear seems FMASK is
  applied). See below for further details.

  The reproducer is available at [2].

  Here is the original text with some minor clarifications:

  It seems that there is something wrong with QEMU with respect to
  handle the singlestepping and AMD64 syscall instruction.

  The AMD "syscall" instruction will clear defined flag in the FMASK
  MSR. Normally the TF flag is set there, so the first instruction when
  kernel is entered after syscall won't cause single step exception in
  the kernel.

  The observed scenario is a unhandled singlestep fault in the kernel or
  host reboot or QEMU crash.

  The possible way how to reproduce it is to single step through any
  function (in userspace) which does "syscall" instruction. After
  syscall is entered QEMU will trigger singlestepping exception in the
  kernel despite that the TF is set in FMASK MSR. Real HW behaves
  correctly and does not trigger this exception.

  
  What is interesting is that I was not able to trigger it if I just enabled TF 
and did the syscall instruction, perhaps for this bug is somewhat important to 
have TF set for previous few instruction.

  
  I have stumbled to this problem while working with our custom OS. However 
after some googling I found out that the NetBSD guys (CCed) are having very 
similar problem and I asked them to prepare a ISO image where the problem ends 
with QEMU SIGSEGV or host reboot. 

  Thanks
  Rudolf

  [1] https://lists.gnu.org/archive/html/qemu-devel/2015-10/msg02289.html
  [2] http://gnats.netbsd.org/49603

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