On Friday, March 3, 2017 at 10:56:26 AM UTC-5, qub...@tutanota.com wrote:
> Fedora-24 template shows updates available. However updates terminal returns 
> error [cannot copy/past results]. I then open gnome terminal and get the 
> following:
> [user@fedora-24 ~]$ sudo dnf update
> Last metadata expiration check: 2:23:51 ago on Fri Mar  3  2017.
> Dependencies resolved.
> ================================================================================
>  Package               Arch          Version               Repository      
> Size
> ================================================================================
> Skipping packages with broken dependencies:
>  gnome-software        x86_64        3.22.5-1.fc24         updates        9.3 
> M
> 
> Transaction Summary
> ================================================================================
> Skip  1 Package
> 
> Nothing to do.
> Sending application list and icons to dom0
> The above output from gnome terminal is completely different from the updates 
> terminal - which refers to skipping "flatpak" package.
> To resolve I reloaded Qubes OS 3.2 but got same errors.
> Any thoughts?
> 
> 
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I had the same exact issue. And yes you only get the message when running the 
update from the qubes-manager, which halts the update.
If updating manually from a terminal it will just skip that package and proceed 
with rest of the updates.

What I did was sudo dnf autoremove and then sudo dnf remove flatpak and just 
hit y to remove dependencies that were listed.  I haven't noticed any problems 
running my vms after doing so, but I also wonder what it is.

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