I created a separate build directory, started with a fresh source directory,
changed directory into the build directory, ran configure from the source
directory.
Then put 'set -v' at the top of <build-directory>/src/scripts/Rcmd before
issuing the gnumake.
The build had the same problem with the packages and provided the following
output at that stage:
gnumake[1]: Leaving directory `/usrX/JunqueYard/R-2.11.1_build/src/library'
gnumake[1]: Entering directory `/usrX/JunqueYard/R-2.11.1_build/src/library/Reco
mmended'
gnumake[2]: Entering directory `/usrX/JunqueYard/R-2.11.1_build/src/library/Reco
mmended'
begin installing recommended package MASS
# ${R_HOME}/bin/Rcmd
## Shell script wrapper for all R CMD commands.
## For internal use only.
R_CMD="${R_HOME}/bin/Rcmd"
export R_CMD
R_VERSION=2.11.1
export R_VERSION
R_OSTYPE="unix"
export R_OSTYPE
## Add 'share/perl' to the perl library path.
if test -n "${PERL5LIB}"; then
PERL5LIB="${R_SHARE_DIR}/perl:${PERL5LIB}"
export PERL5LIB
else
PERLLIB="${R_SHARE_DIR}/perl:${PERLLIB}"
export PERLLIB
fi
## Append 'share/texmf' to TeX's input search path.
if test -z "$TEXINPUTS}"; then
TEXINPUTS=".:${R_SHARE_DIR}/texmf:"
else
TEXINPUTS=".:${TEXINPUTS}:${R_SHARE_DIR}/texmf:"
fi
export TEXINPUTS
. "${R_HOME}/etc${R_ARCH}/Renviron"
export `sed 's/^ *#.*//; s/^\(.*\)=.*/\1/' "${R_HOME}/etc${R_ARCH}/Renviron"`
extra=
case "${1}" in
perl)
cmd="${PERL}" ;;
awk)
cmd="${AWK}" ;;
## this was a separate command prior to 2.10.0
Rd2txt)
cmd="${R_HOME}/bin/Rdconv"
extra="-t txt"
;;
Rd2pdf)
cmd="${R_HOME}/bin/Rd2dvi"
extra="--pdf"
;;
*)
if test -x "${R_HOME}/bin/${1}"; then
cmd="${R_HOME}/bin/${1}"
else
cmd="${1}"
fi
;;
esac
shift
exec "${cmd}" ${extra} "$...@}"
/usr/local/JunqueYard/R-2.11.1_build/bin/Rcmd: @: not found
gnumake[2]: *** [MASS.ts] Error 1
gnumake[2]: Leaving directory `/usrX/JunqueYard/R-2.11.1_build/src/library/Recom
mended'
gnumake[1]: *** [recommended-packages] Error 2
gnumake[1]: Leaving directory `/usrX/JunqueYard/R-2.11.1_build/src/library/Recom
mended'
gnumake: *** [stamp-recommended] Error 2
I think that I am following the instructions in the "R Installation and
Administration" manual, but results would suggest otherwise. I greatly
appreciate any suggestions.
Regards,
Bill
>Return-path: <pda...@gmail.com>
>Date: Wed, 09 Jun 2010 23:10:12 +0200
>From: Peter Dalgaard <pda...@gmail.com>
>Subject: Re: [Rd] Question on trying to build R 2.11.1 on Tru64(aka OSF1)
>To: bill.gless...@cwu.edu
>Cc: r-devel@r-project.org
>
>bill.gless...@cwu.edu wrote:
>> First I tried 'setenv R_SHELL /usr/local/bin/bash', as bash is the weapon
>> of choice for the faculty wishing to use R, then ran ./configure as before.
>> The ./configure output line
>>
>> using as R_SHELL for scripts ... /usr/local/bin/bash
>>
>> would seem to indicate that the R_SHELL environment variable was recognized
>> and acknowledged. However, I got the same build error:
>
>Two ideas (longshots...)
>
>(a) You're building in the source directory. Try not doing that an start
>with clean sources.
>
>(b) insert "set -v" at the top of Rcmd so that you see the script as it
>is executed.
>
>--
>Peter Dalgaard
>Center for Statistics, Copenhagen Business School
>Phone: (+45)38153501
>Email: pd....@cbs.dk Priv: pda...@gmail.com
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