If I understand correctly, all vignettes in a package are built in the same R process. Global options, loaded packages, etc., in an earlier vignette persist in later vignettes. This can introduce user confusion (e.g., when a later vignette builds successfully because a package is require()'ed in an earlier vignette, but not the current one), difficult-to-identify bugs (e.g., when a setting in an earlier vignette influences calculation in a latter vignette), and misleading information about reproducibility (e.g., when the sessionInfo() of a later vignette reflects packages used in earlier vignettes).

I believe the relevant code is at

src/library/tools/R/Vignettes.R:505

        output <- tryCatch({
            ## FIXME: run this in a separate process
            engine$weave(file, quiet = quiet)
            setwd(startdir)
            find_vignette_product(name, by = "weave", engine = engine)
        }, error = function(e) {
            stop(gettextf("processing vignette '%s' failed with 
diagnostics:\n%s",
                 file, conditionMessage(e)), domain = NA, call. = FALSE)
        })

Is building of each vignette in separate processes a reasonable feature request?

Martin
--
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M1 B861
Phone: (206) 667-2793

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