I have a local library which depends on the expm library. The expm library is loaded into
my personal space and I have the environment variable R_LIBS_USER set appropriately. The
command "library(expm)" works just fine from the command line, and in fact the package
works if I do the source() and dyn.load() commands by hand.
The following sequence works:
tmt% R CMD build --no-build-vignettes hmm
tmt% R CMD INSTALL hmm*gz
tmt% R
> library(hmm)
> run some commands from the hmm library
But "R CMD check hmm.gz" fails with
ERROR: dependency ‘expm’ is not available for package ‘hmm’
* removing ‘/people/biostat2/therneau/consult/alzheimer/hmm.Rcheck/hmm’
The R CMD build command fails similarly if I let it try to build the vignettes.
What's up?
Terry T
> sessionInfo()
R version 3.3.1 (2016-06-21)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: CentOS release 6.8 (Final)
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