The survival package, like many others, has several helper functions that are not declared in the namespace, since their only use is to be called by other "main" functions of the package. This works well since the functions in the survival namespace can see them --- without ::: arguments --- and others don't.
Until a situation I ran into this week, for which I solicit comments or advice. The concordance function is a new addition, and it has one case where the same underlying helper function is called multiple times, with many arguments passed through from the parent. I thought that this would be a good use for the trick we use for model.frame, so I have code like this: concordance.coxph <- function(fit, ..., newdata, group, ymin, ymax, timewt=c("n", "S", "S/G", "n/G", "n/G2"), influence=0, ranks=FALSE, timefix=TRUE) { Call <- match.call() . . . cargs <- c("ymin", "ymax","influence", "ranks", "timewt", "timefix") cfun <- Call[c(1, match(cargs, names(Call), nomatch=0))] cfun[[1]] <- quote(cord.work) cfun$reverse <- TRUE rval <- eval(cfun, parent.frame()) This worked fine in my not-in-a-namespace test bed, but then fails when packaged up for real: the code can't find the helper function cord.work! The rule that survival package functions can "see" their undeclared helpers fails. I got it working by changing parent.frame() to environment(concordance) in the eval() call. Since everything used by cord.work is explicitly passed in its argument list this does work. Comments or suggestions? (I avoid having survival:: in the survival package because it messes up my particular test bed.) Terry [[alternative HTML version deleted]] ______________________________________________ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel