Prof Brian Ripley wrote:
On Sun, 7 Nov 2004, Uwe Ligges wrote:
Prof Brian Ripley wrote:
On Sat, 6 Nov 2004, Uwe Ligges wrote:
Liaw, Andy wrote:
Gabor,
I guess is that you did not try to run R CMD INSTALL before R CMD check. R
CMD check will try to install the package first (in pkg.Rcheck), and only if
that's successful would checks be done.
The installation process will concatenate all R files in R/ to a single file
and essentially source() that in upon package loading. That's where you
would see the syntax error. I believe the recommended way is to install the
package and play with that a bit first, before doing R CMD check. You'd
find some problems are much easier to find that way (e.g., errors in
NAMESPACE).
Indeed, that is the advice: you often get much more informative error
messages that R CMD check hides. To be explicit, install and then load
the package and check its basic functionality before R CMD check.
However, if you get a syntax error it is either in the NAMESPACE file or
one of the *.R files, and sourcing all of them will rapidly find which.
From: Gabor Grothendieck
I was running R CMD check on Windows XP 2.0.1beta and
got this:
Error in parse(file, n, text, prompt) : syntax error on 602
I found that syntax errors quite frequently are caused by missing
newlines at the end of files.
What about changing the build scipts so that a newline is inserted after
each of those files?
Time to get a better editor, Uwe! Those I use do not allow you to
save a .R file without a final NL. (I would have thought you would have
learned not to leave an incomplete last line after being bitten a few
times. In Emacs, set `Require Final Newline', and it's the default in
vi.)
Well, you already know I'm using WinEdt which also saves .R files
without final newline, but, e.g., Windows' native notepad.exe leaves the
final line as is ...
Yes, well, notepad.exe is most programmer's idea of the worst possible
editor.
Is it not possible to get WinEdt to make sure the final line is complete?
Arrgh, sorry, I meant "which also saves .R files *with* final newline"!!!
However, this is not done by the `build scipts' (or even scripts) but
by tools:::.install_package_code_files() at
if(!all(file.append(outFile, codeFiles)))
stop("unable to write code files")
So that is the place to alter this. There would be a small overhead both
at INSTALL time and load time (but the latter only for packages which are
not save-imaged or lazy-loaded), I suspect a negligible one. In any case
file.append could be written more efficiently for this case (outFile is
opened for each of the codeFiles) with making sure each file ended in LF
made an option.
Have not looked that closely - I will put it on my ToDo list, but with a
minor priority, i.e. it won't be done this year, if nobody else (like
those bitten by the problem) is going to contribute.
It is already done in R-devel, but I had to work quite hard to make a test
example (I used WordPad, in the end).
Great, thanks!
Uwe
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