Hello all!
I am performingsome clustering analysis on microarray data using
agnes{cluster} and I have created my own dissimilarity matrix according to a
distance measure different from "euclidean" or "manhattan" etc. My question
is, if I choose for example method="complete", how are the distances
between the elements calculated? Are they taken form the dissimilarity
matrix I have provided as the first argument?
clust.complete.agnes<-agnes(as.dist(D),diss="TRUE",method="complete")
Thank you very much,
Eleni
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