On 21/06/2010 9:06 PM, G FANG wrote:
Hi,

I want to get the unique set from a large numeric k by 1 vector, k is
in tens of millions

when I used the matlab function unique, it takes less than 10 secs

but when I tried to use the unique in R with similar CPU and memory,
it is not done in minutes

I am wondering, am I using the function in the right way?

dim(cntxtn)
[1] 13584763        1
uniqueCntxt = unique(cntxtn);    # this is taking really long

What type is cntxtn? If I do that sort of thing on a numeric vector, it's quite fast:

> x <- sample(100000, size=13584763, replace=T)
> system.time(unique(x))
  user  system elapsed
  3.61    0.14    3.75

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