Thank you for your answer, Jim! I will try it and post what I find.
cheers,
Charles
On Wed, Oct 27, 2010 at 3:46 PM, jim holtman <jholt...@gmail.com> wrote:
> put:
>
> options(error=utils::recover)
>
> in your script so that when an error occurs you are dropped into the
> 'browser' so that you can examine the variables at that point in time.
> There are several references on how to use the debugging tools in R
> that will help you resolve your problem. We can not tell from the
> information you provided what the problem is. You need to at least
> provide provide commented, minimal, self-contained, reproducible code
> so other can reproduce the error and provide feed back.
>
> On Wed, Oct 27, 2010 at 9:27 AM, Charles Novaes de Santana
> <charles.sant...@imedea.uib-csic.es> wrote:
> > Hi everyone,
> >
> > I am a newbie in R and in this discussion list. I am trying to use R
> package
> > "ncdf" to read values of temperature from a NCDF file. I did it before to
> > another file using the function "get.var.ncdf", but now there is an error
> > that I can not solve, and I would really appreciate if you could help me.
> >
> > I am using R version 2.11.1 (2010-05-31) in a machine with Linux
> > 2.6.26-2-amd64.
> >
> >> library(ncdf)
> >> file_temp<-open.ncdf("File.nc")
> >> temp<-get.var.ncdf(file_temp,"tasmax",verbose=TRUE)
> > [1] "get.var.ncdf: entering. Here is varid:"
> > [1] "tasmax"
> > [1] "checking to see if passed varid is actually a dimvar"
> > [1] "entering vobjtodimname with varid= tasmax"
> > [1] "vobjtodimname: is a character type varid. This file has 3 dims"
> > [1] "vobjtodimname: no cases found, returning FALSE"
> > [1] "get.var.ncdf: isdimvar: FALSE"
> > [1] "vobjtovarid: entering with varid=tasmax"
> > [1] "Variable named tasmax found in file with varid= 4"
> > [1] "vobjtovarid: returning with varid deduced from name; varid= 4"
> > [1] "get.var.ncdf: ending up using varid= 4"
> > [1] "ndims: 3"
> > [1] "get.var.ncdf: varsize:"
> > [1] 68 40 21275
> > [1] "get.var.ncdf: start:"
> > [1] 1 1 1
> > [1] "get.var.ncdf: count:"
> > [1] 68 40 21275
> > [1] "get.var.ncdf: totvarsize: 57868000"
> > [1] "Getting var of type 4 (1=short, 2=int, 3=float, 4=double, 5=char,
> > 6=byte)"
> > [1] "get.var.ncdf: C call returned 0"
> > [1] "count.nodegen: 68 Length of data: 57868000"
> > [2] "count.nodegen: 40 Length of data: 57868000"
> > [3] "count.nodegen: 21275 Length of data: 57868000"
> > [1] "get.var.ncdf: final dims of returned array:"
> > [1] 68 40 21275
> > [1] "varid: 4"
> > [1] "nc$varid2Rindex: 0" "nc$varid2Rindex: 0" "nc$varid2Rindex: 0"
> > [4] "nc$varid2Rindex: 1"
> > [1] "nc$varid2Rindex[varid]: 1"
> > [1] "get.var.ncdf: setting missing values to NA"
> > Error en mv * 1e-05 : non-numeric argument to binary operator
> >
> > Thank you very much for your attention!
> >
> > Cheers,
> >
> > Charles
> >
> > --
> > Um axé! :)
> >
> > --
> > Charles Novaes de Santana
> > PhD student - Global Change
> > Laboratorio Internacional de Cambio Global
> > Department of Global Change Research
> > Instituto Mediterráneo de Estudios Avanzados(CSIC/UIB)
> > Calle Miquel Marques 21, 07006
> > Esporles - Islas Baleares - España
> >
> > [[alternative HTML version deleted]]
> >
> >
> > ______________________________________________
> > R-help@r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-help
> > PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained, reproducible code.
> >
> >
>
>
>
> --
> Jim Holtman
> Cincinnati, OH
> +1 513 646 9390
>
> What is the problem that you are trying to solve?
>
--
Um axé! :)
--
Charles Novaes de Santana
PhD student - Global Change
Laboratorio Internacional de Cambio Global
Department of Global Change Research
Instituto Mediterráneo de Estudios Avanzados(CSIC/UIB)
Calle Miquel Marques 21, 07006
Esporles - Islas Baleares - España
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