On Nov 15, 2010, at 4:43 PM, patze003 wrote:


Hello Everyone -

I want to print a number of results from lme function objects out to a txt
file.  How could I do this more efficiently than what you see here:

out2 <- capture.output(summary(mod2a))
out3 <- capture.output(summary(mod3))
out4 <- capture.output(summary(mod5))
out5 <- capture.output(summary(mod6))
out6 <- capture.output(summary(mod7))
cat(out2,file="out.txt",sep="\n",append=TRUE)
cat(out3,file="out.txt",sep="\n",append=TRUE)
cat(out4,file="out.txt",sep="\n",append=TRUE)
cat(out5,file="out.txt",sep="\n",append=TRUE)
cat(out6,file="out.txt",sep="\n",append=TRUE)
cat(third,file="out.txt",sep="\n",append=TRUE)


Here's an example of what I tried, but didn't work.

for (i in ls(pat = "mod"))
        { out <- capture.output(summary[[i]])
                cat(out, file = "results_paired.txt", sep = "\n", append = TRUE)
                }

You could have done something along these lines:

for (i in ls(pat = "mod"))
        { out <- capture.output( summary(get(i)),
file = paste("results_paired",".txt", sep = "."),
                           append = TRUE)
                }

Note use of get() and not sending to an R object but rather using capture.output()'s side effect strategy.

--


David Winsemius, MD
West Hartford, CT

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