On Dec 8, 2010, at 3:10 PM, Wade Wall wrote:

Hi all,

How can one evaluate NAs in a numeric dataframe column? For example, I have a dataframe (demo) with a column of numbers and several NAs. If I write
demo.df >= 10, numerals will return TRUE or FALSE, but if the value is
"NA", "NA" is returned. But if I write demo.df == "NA", it returns as "NA" also. I know that I can remove NAs, but would like to keep the dataframe as is without creating a subset. I basically want to add a line that evaluates
the NA in the demo dataframe.

That looks really, really painful. Why not use the function findInterval and then do a lookup in a character vector. Then you can throw away that loopy construct completely.

> demo  <- data.frame(Area = runif(10, 0, 100))
> demo$catarea <- findInterval(demo$Area, c(0,25,50,75,100))
> demo
        Area catarea
1  71.440401       3
2   8.438097       1
3  45.492178       2
4  50.669996       3
5  15.444114       1
6  33.954948       2
7  19.738747       1
8  56.485654       3
9  29.218921       2
10 74.204611       3
> demo$catname <- c("S01","S02", "S03","S04")[demo$catarea]
> demo
        Area catarea catname
1  71.440401       3     S03
2   8.438097       1     S01
3  45.492178       2     S02
4  50.669996       3     S03
5  15.444114       1     S01
6  33.954948       2     S02
7  19.738747       1     S01
8  56.485654       3     S03
9  29.218921       2     S02
10 74.204611       3     S03

--
David.

As an example, I want to assign rows to classes based on values in
demo$Area. Some of the values in demo$Area are "NA"

for (i in 1:nrow(demo)) {
if (demo$Area[i] > 0 && demo$Area[i] < 10) {Class[i]<-"S01"} ## 1-10 cm2
 if (demo$Area[i] >= 10 && demo$Area[i] < 25) {Class[i] <- "S02"} ##
10-25cm2
if (demo$Area[i] >= 25 && demo$Area[i] < 50) {Class[i] <-"S03"} ## 25-50
cm2
if (demo$Area[i] >= 50 && demo$Area[i] < 100) {Class[i] <-"S04"} ## 50-100
cm2
 if (demo$Area[i] >= 100 && demo$Area[i] < 200) {Class[i] <- "S05"} ##
100-200 cm2
 if (demo$Area[i] >= 200 && demo$Area[i] < 400) {Class[i] <- "S06"} ##
200-400 cm2
 if (demo$Area[i] >= 400 && demo$Area[i] < 800) {Class[i] <- "S07"} ##
400-800 cm2
if (demo$Area[i] >= 800 && demo$Area[i] < 1600) {Class[i] <- "S08"} ##
800-1600 cm2
if (demo$Area[i] >= 1600 && demo$Area[i] < 3200) {Class[i] <- "S09"} ##
1600-3200 cm2
 if (demo$Area[i] >=3200) {Class[i] <- "S10"} ## >3200 cm2
 }

What happens is that I get the message "Error in if (demo$Area[i] > 0 &&
demo$Area[i] < 10) { : missing value where TRUE/FALSE needed"

Thanks for any help

Wade

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David Winsemius, MD
West Hartford, CT

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