On Jan 20, 2011, at 2:08 PM, Mojo wrote:

I'm new to R and some what new to the world of stats. I got frustrated with excel and found R. Enough of that already.

I'm trying to test and correct for Heteroskedasticity

I have data in a csv file that I load and store in a dataframe.

> ds <- read.csv("book2.csv")
> df <- data.frame(ds)

I then preform a OLS regression:

> lmfit <- lm(df$y~df$x)

To test for Heteroskedasticity, I run the BPtest:

> bptest(lmfit)

       studentized Breusch-Pagan test

data:  lmfit
BP = 11.6768, df = 1, p-value = 0.0006329

From the above, if I'm interpreting this correctly, there is Heteroskedasticity present. To correct for this, I need to calculate robust error terms. From my reading on this list, it seems like I need to vcovHC.

> vcovHC(lmfit)
             (Intercept)         df$x
(Intercept)  1.057460e-03 -4.961118e-05
df$x       -4.961118e-05  2.378465e-06

I'm having a little bit of a hard time following the help pages. So is the first column the intercepts and the second column new standard errors?

No, It's a variance-covariance matrix, so all of the elements are variance estimates. To get what you are expecting ... the SE's of the coefficients (which are the diagonal elements of a var-covar matrix, .... you would wrap sqrt(diag(.)) around that object.



Thanks,
mojo

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David Winsemius, MD
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