Just load the package and type

qvalue

so you will see what the underlying R code is. You will find some parts of the code may be worth to be improved, hence time to contribute to the package.

Uwe Ligges




On 19.04.2011 07:53, Chee Chen wrote:
Dear All,
In Storey's estimator of the proportion of true nulls, the estimator depends on 
the tuning parameter lamda.
Suppose now that an estimator of this proportion has been obtained by the 
qvalue package, what is the lamda that
corresponds to the estimate? How to get this lamda?
Thanks,
-Chee

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