Dear R-helpers, I am using the package "gee" to run a marginal model.
Here is the output. In my simulated data, both x and z are time-varying, so I include their interaction terms with time indicator (i.e. tind=0, if time 1, and 1 if time 2) The data is simulated, so the true parameter of z both at time 1 and time 2 is 5, which is very close from the model output for time 1, z = 5.0757760, and for time 2, z is 5.0757760-0.6379866 = ~5 > model=gee(y~x+z+x*tind+z*tind, family=gaussian(link = "identity"), id=sid, corstr="exchangeable") Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27 running glm to get initial regression estimate (Intercept) x z tind x:tind z:tind 2.9342186 1.5002601 5.0757760 2.0846327 0.1869748 -0.6379866 However, when I use the summary command, the coefficients are changed. Am I missing anything here ?? > summary(model) GEE: GENERALIZED LINEAR MODELS FOR DEPENDENT DATA gee S-function, version 4.13 modified 98/01/27 (1998) Model: Link: Identity Variance to Mean Relation: Gaussian Correlation Structure: Exchangeable Call: gee(formula = y ~ x + z + x * tind + z * tind, id = sid, family = gaussian(link = "identity"), corstr = "exchangeable") Summary of Residuals: Min 1Q Median 3Q Max -5.9273676 -2.0072725 -0.7169515 2.3709969 8.2377283 Coefficients: Estimate Naive S.E. Naive z Robust S.E. Robust z (Intercept) 4.1450504 0.331866699 12.490106 0.264666616 15.661403 x 1.5155102 0.008479614 178.723972 0.006854627 221.093020 z 0.6463947 0.111148094 5.815617 0.100379444 6.439513 tind 1.5986872 0.163851622 9.756920 0.175947744 9.086148 x:tind 0.1434216 0.005288708 27.118450 0.005924767 24.207123 z:tind 4.2951055 0.168647198 25.467992 0.166776520 25.753658 Estimated Scale Parameter: 6.800334 Number of Iterations: 10 Any helps would be very much appreciated! Thank you, Carrie-- [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.