On 12/05/2011 7:44 PM, felipe beckedorff wrote:
Hello I have downloaded the spp_1.10.tar.gz and  it contains compiled code. I
installed the Rtools<http://www.murdoch-sutherland.com/Rtools> and I
tried to install the package (spp_1.10.tar.gz) but it not worked bellow it
is the error message.
Could somebody please help me with this.

It looks as though that package (or something with the same name, available here: http://compbio.med.harvard.edu/Supplements/ChIP-seq/) has not been written in a way that will work on Windows. So you should try it on a system that is supported. Otherwise, you can writing a configure script that works on Windows the way the the configure script in it works on Unix, but you'll probably need a lot of work to get it going.

Duncan Murdoch


Thank you

* installing *source* package 'spp' ...

    **********************************************
    WARNING: this package has a configure script
          It probably needs manual configuration
    **********************************************


** libs

*** arch - i386

*** arch - x64
ERROR: compilation failed for package 'spp'
* removing 'C:/Program Files/R/R-2.13.0/library/spp'
Mensagens de aviso perdidas:
1: execução do comando 'C:/PROGRA~1/R/R-213~1.0/bin/x64/R CMD INSTALL -l
"C:/Program Files/R/R-2.13.0/library"
"D:/Felipe/doutorado/bioinfo/spp_1.10.tar.gz"' teve status 1
2: In install.packages(filename, type = "source", repos = NULL) :
   installation of package 'D:/Felipe/doutorado/bioinfo/spp_1.10.tar.gz' had
non-zero exit status

That error basically just says that something failed when trying to compile the package. It looks as though it may have worked for the i386 architecture; if 32 bits is enough, then

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