Paul, Do you have the RSQLite package installed?
In a clean R, what does require(RSQLite) return? If you don't have it installed, then install the package: install.package("RSQLite", dep = TRUE) If that proceeds correctly - you may need external libraries of headers for RSQLite to compile against, try to load the genefilter package again and see if this has rectified the problem. HTH G On Fri, 2008-02-29 at 16:04 +0100, Paul Hammer wrote: > hi members, > > i try to load the package genefilter but i get always this error message: > > _R code:_ > >library(genefilter) > Error in dyn.load(file, ...) : > unable to load shared library > '/usr/local/lib64/R/library/RSQLite/libs/RSQLite.so': > /usr/local/lib64/R/library/RSQLite/libs/RSQLite.so: undefined symbol: > sqlite3_column_text > Error: package/namespace load failed for 'genefilter' > >library(RSQLite) > Error in dyn.load(file, ...) : > unable to load shared library > '/usr/local/lib64/R/library/RSQLite/libs/RSQLite.so': > /usr/local/lib64/R/library/RSQLite/libs/RSQLite.so: undefined symbol: > sqlite3_column_text > Error: package/namespace load failed for 'RSQLite' > > ------------------------------------------------------------------- > > the file RSQLite.so exists and has all rights. i use fedora 7 with 64 > bit technology. > > any suggestions? > > thanks > paul > > > sessionInfo() > R version 2.6.2 (2008-02-08) > x86_64-unknown-linux-gnu > > locale: > LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C > > attached base packages: > [1] splines tools stats graphics grDevices utils datasets > [8] methods base > > other attached packages: > [1] survival_2.34 Biobase_1.16.3 DBI_0.2-4 > > loaded via a namespace (and not attached): > [1] rcompgen_0.1-17 > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT. [w] http://www.freshwaters.org.uk %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.