On Jun 28, 2011, at 1:44 PM, Edward Patzelt wrote:

R help -

I am attempting to write a script that has multiple subjects in 1 data file. Each subject has multiple rows with columns as variables. Here is my code, I am having problem executing it on each unique subject id (dat $Subject).

One problem that I see is that you are calling all of your files the same thing (i.e. overwriting earlier results. Why aren't you using the loop index in the naming process?

(And aeppnd is a logical argument in write.table.)

?write.table

--
David.

  getwd()

setwd("/Users/edwardpatzelt/Desktop/Neuroimaging/MERIT/SRRT/merge")


dat <- read.table("test2.txt", header = TRUE, na.strings = NA,
stringsAsFactors = FALSE, sep = "\t")


for(i in 1:length(dat))

{

for (i in 1:)dat[(unique(dat$Subject)),)]

{

   colg <- dat[grep("Green", dat$CueProbe),]

colg <- data.frame(colg$SRRTCue.OnsetTime/1000, (colg $SRRTFix2.OnsetTime- colg$SRRTCue.OnsetTime)/1000, (ifelse((colg$SRRTProbe.ACC == 1 | colg $Probe==
"+"), 1, 0)))

  colr <- dat[grep("Red", dat$CueProbe),]

colr <- data.frame(colr$SRRTCue.OnsetTime/1000, (colr $SRRTFix2.OnsetTime- colr$SRRTCue.OnsetTime)/1000, (ifelse((colr$SRRTProbe.ACC == 1 | colr $Probe==
"+"), 1, 0)))

write.table(colg, file = paste(dat$Subject[[1]], sep = "\t", append =
"green.txt"), col.names = FALSE, row.names = FALSE)

write.table(colr, file = paste(dat$Subject[[1]], sep = "\t", append =
"red.txt"), col.names = FALSE, row.names = FALSE)

    }

 }






--
Edward H. Patzelt
Research Assistant – TRiCAM Lab
University of Minnesota – Psychology/Psychiatry
VA Medical Center
Office: S355 Elliot Hall - Twin Cities Campus
Phone: 612-626-0072  Email: patze...@umn.edu

Please consider the environment before printing this email
www.psych.umn.edu/research/tricam

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David Winsemius, MD
West Hartford, CT

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