Thanks Duncan, Martin,
You both provided exactly what I needed!
Regards,
Mike
---
XKCD <http://www.xkcd.com>
On Mon, Aug 8, 2011 at 5:21 PM, Duncan Murdoch <murdoch.dun...@gmail.com>wrote:
> On 08/08/2011 8:04 PM, Mike Williamson wrote:
>
>> Hi All,
>>
>> I have tried to find an answer within documentation, but I cannot:
>>
>> o How can call a class "slot" without knowing the name a priori?
>>
>
> See ?slot.
>
>
>
>> E.g., let's say I use the "pcaMethods" library to create a "pcaRes"
>> object. How can I call parts of that object without using the specific
>> names of the object in the call?
>>
>> example code:
>>
>> library(pcaMethods)
>> myMatrix<- matrix(runif(1e4), ncol=100) ## silly, but sufficient for
>> example
>> myPCA<- pca(myMatrix) ## creates a "pcaRes" S4 class
>>
>> for (i in slotNames(myPCA) ) {
>> summary(myPCA@i) ### I know this doesn't work, but this is the
>> question... what grammar could I use?
>>
>
> summary(slot(myPCA, i))
>
> Duncan Murdoch
>
> }
>>
>> ################
>>
>> I would like to be able to print out the summary for each of the
>> components
>> of the class "pcaRes" without knowing a priori the names of those
>> components. I could, for example in the above case, type in
>> summary(myPCA@completeObs) to get a summary of the input matrix. But I
>> HAVE
>> TO TYPE "@completeObs". In the non-S4 world, I could type myPCA[[i]] for
>> lists, where "i" could be looping through either the list names, or the
>> list
>> indices. Similarly, I could type myPCA[i] for arrays, where "i" again can
>> be either a numeric index or the name.
>>
>> Without this ability to identify portions within an array / loop context,
>> it
>> becomes exceedingly difficult to work in "S4 land". How is this sort of
>> thing done?
>>
>> Thank you!
>> Mike
>>
>>
>>
>> ---
>> XKCD<http://www.xkcd.com>
>>
>> [[alternative HTML version deleted]]
>>
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>>
>
>
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