I apologize to the list and you if I am mis-understanding something, but...
As an example: ind2 occurs with ind1 only in cluster#3, so why does it get a value of 4 in your "similarity" matrix? Also, if this isn't a recognized similarity algorithm, perhaps you should at the very least put quotes around "similarity". Again, sorry if I am confused here. set wrote > > Hello R-users, > > I've got a file with individuals as colums and the clusters where they > occur in as rows. And I wanted a similarity matrix which tells me how many > times each individual occurs with another. My eventual goal is to make > Venn-diagrams from the occurence of my individuals. > > So I've this: > > cluster ind1 ind2 ind3 etc. > 1 0 1 2 > 2 3 0 1 > 3 1 1 1 > > And I want to go to this: > ind1 ind2 ind3 > ind1 0 4 2 > ind2 4 0 4 > ind3 2 4 1 > > is there a way to do this? > Thank you for your help > -- View this message in context: http://r.789695.n4.nabble.com/similarity-matrix-tp4157576p4157840.html Sent from the R help mailing list archive at Nabble.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
