Bert,
I may be mistaken, but I thought Ryan wrote "write code that
automatically *imports
data* from different files (with different lengths-just one variable)", so,
I was referring to doing something with the data before it gets into R. I
understand that one should not need to write out data and then re-read it
in some way. As I said, those more experienced with R will probably offer
better ideas.
Tom
On Mon, Dec 12, 2011 at 5:05 PM, Bert Gunter <gunter.ber...@gene.com> wrote:
> Sorry -- previous versiuon prematurely sent. Full version is:
>
> Yikes! You should never have to do this sort of thing (writing stuff
> out to files, etc.)
>
> What is wanted, I believe, is ?do.call as in
>
> do.call(boxplot, z)
>
> where z is list(a,b,c) as Sarah described.
>
> However, I think you might do even better in terms of controlling
> options, labels, etc. if you would get the data into standard flat
> file format (data frame) as
>
> Result Source
> 1 a
> 3 b
> 2 b
> 5 c
> ... etc.
>
> (This is easy to do in R and via many packages.)
> and then use he formula interface in the lattice ?bwplot function for th
> eplot.
>
> Cheers,
> Bert
>
> >
> > result
> >
> > On Mon, Dec 12, 2011 at 1:43 PM, Thomas Adams <thomas.ad...@noaa.gov>
> wrote:
> >> Ryan,
> >>
> >> I think you could do what you want by having the vector data written to
> >> separate files; then create a file containing the individual file
> names. In
> >> R, read the file containing the list of file names and loop through this
> >> reading in the individual vector files. Maybe this is an inelegant,
> brute
> >> force approach, but it has worked for me with essentially the same
> problem.
> >>
> >> Tom
> >>
> >> On Mon, Dec 12, 2011 at 4:24 PM, Ryan Utz <utz.r...@gmail.com> wrote:
> >>
> >>> Hello,
> >>>
> >>> I'm attempting to write a code that automatically imports data from
> >>> different files (with different lengths-just one variable) and makes
> tidy
> >>> box plots for comparison. I can successfully import the data and
> create a
> >>> list of the vectors I want to compare. But I cannot, for the life of
> me,
> >>> figure out how to generate box plots using the "list" option. Suppose
> these
> >>> are my data:
> >>>
> >>> a<-c(1,1,1,1,2,3,2,1,2,3)
> >>> b<-c(2,2,2,3,4,4,4,3,3)
> >>> c<-c(4,3,3,2,3,4,5,3,3,3,4,4,5,6,3,2)
> >>>
> >>> And this is my list of the vectors I'm interested in:
> >>>
> >>> z<-list(c("a","b","c"))
> >>>
> >>> Well, this successfully generates the kind of boxplot I want:
> >>>
> >>> boxplot(a,b,c)
> >>>
> >>> But this does not:
> >>>
> >>> boxplot(z)
> >>>
> >>> Because I'm trying to write an automatic plot-generator as the amount
> of
> >>> data I'm working with will typically vary, I need to write this to
> handle
> >>> any number of data vectors.
> >>>
> >>> I've tried every imaginable means of tweaking the name of "z", with
> zero
> >>> success. And I've scoured the help pages for about 45 minutes (just to
> >>> preempt any "read the help" responses). Please help!
> >>>
> >>> Thanks,
> >>> Ryan
> >>>
> >>> --
> >>>
> >>> Ryan Utz, Ph.D.
> >>> Aquatic Ecologist/STREON Scientist
> >>> National Ecological Observatory Network
> >>>
> >>> Home/Cell: (724) 272-7769
> >>> Work: (720) 836-2488
> >>>
> >>> [[alternative HTML version deleted]]
> >>>
> >>> ______________________________________________
> >>> R-help@r-project.org mailing list
> >>> https://stat.ethz.ch/mailman/listinfo/r-help
> >>> PLEASE do read the posting guide
> >>> http://www.R-project.org/posting-guide.html
> >>> and provide commented, minimal, self-contained, reproducible code.
> >>>
> >>
> >>
> >>
> >> --
> >>
> >> Thomas E Adams
> >> National Weather Service
> >> Ohio River Forecast Center
> >> 1901 South State Route 134
> >> Wilmington, OH 45177
> >> EMAIL: thomas.ad...@noaa.gov
> >> VOICE: 937-383-0528
> >> FAX: 937-383-0033
> >>
> >> [[alternative HTML version deleted]]
> >>
> >> ______________________________________________
> >> R-help@r-project.org mailing list
> >> https://stat.ethz.ch/mailman/listinfo/r-help
> >> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> >> and provide commented, minimal, self-contained, reproducible code.
> >
> >
> >
> > --
> >
> > Bert Gunter
> > Genentech Nonclinical Biostatistics
> >
> > Internal Contact Info:
> > Phone: 467-7374
> > Website:
> >
> http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm
>
>
>
> --
>
> Bert Gunter
> Genentech Nonclinical Biostatistics
>
> Internal Contact Info:
> Phone: 467-7374
> Website:
>
> http://pharmadevelopment.roche.com/index/pdb/pdb-functional-groups/pdb-biostatistics/pdb-ncb-home.htm
>
--
Thomas E Adams
National Weather Service
Ohio River Forecast Center
1901 South State Route 134
Wilmington, OH 45177
EMAIL: thomas.ad...@noaa.gov
VOICE: 937-383-0528
FAX: 937-383-0033
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