See FAQ "How can I save the result of each iteration in a loop into a
separate file?"
you will certainly find the the principle given therein can be applied
the other way round or reading as well.
Uwe Ligges
On 21.12.2011 02:32, Debs Majumdar wrote:
Hi,
I have a list of files in one of my working directories:
"chr17.chunk1.dose.fvd"
"chr17.chunk1.dose.fvi"
"chr17.chunk1.prob.fvd"
"chr17.chunk1.prob.fvi"
...........
.........
........
"chr17.chunk10.dose.fvd"
"chr17.chunk10.dose.fvi"
"chr17.chunk10.prob.fvd"
"chr17.chunk10.prob.fvi"
And I am using the *.dose files to convert the data into a text file.
For a singlefile, the following works:
chr17chunk1dose<- databel("chr17.chunk1.dose")
databel2text(databel=chr17chunk1dose, file="chr1_chunk1.dose.txt",
NAString="NA", row.names=TRUE, col.names=TRUE, transpose=FALSE)
I am trying to do the conversion inside a loop for all the files at a time but
can't figure out how to do it. Any hep is appreciated.
#### I am trying something like this:
flies<- list.files(pattern="dose")
for(i in files){
dose<- databel(i)[[1]]
databel2text<- (databel = dose, file="chr17_chunk1.dose.txt",
NAString="NA", row.names=TRUE, col.names=TRUE, transpose=FALSE)
}
########
Thanks,
Debs
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
