On 12/22/2011 05:50 AM, Naveen Thota wrote:
Dear All,
I am trying to finding overlapping regions in two diff datasets for that I
am using IRanges. But I am getting an error in the process of doing the
overlap. Advance thanks

  df3.rl<-RangedData(IRanges(start=df3$V3,width=1),
+ space=df3$start)
Error in .normargSEW0(start, "start") :
   'start' must be a numeric vector (or NULL)

Please ask questions about Bioconductor packages on the Bioconductor mailing list

http://www.bioconductor.org/help/mailing-list/

The problem would appear to be that class(df3$V3) is not "numeric"

Martin


Kumar

        [[alternative HTML version deleted]]

______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.


--
Computational Biology
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109

Location: M1-B861
Telephone: 206 667-2793

______________________________________________
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Reply via email to