On 09/14/2012 05:00 AM, r-help-requ...@r-project.org wrote:
Hello,

Why the correlation between the random effects is negative?
library(coxme)
rats1<- coxme(Surv(time, status) ~ (1|litter), rats)
random.effects(rats1)[[1]] #one value for each of the 50 litters
print(rats1)

rats2<- lmekin(time ~ (1|litter), rats)
fixed.effects(rats2)
random.effects(rats2)[[1]] #one value for each of the 50 litters
print(rats2)

cor(random.effects(rats1)[[1]],random.effects(rats2)[[1]])

Thanks

Because coxph models the death rate, so large coefficients indicate bad news, and lme is modeling the surival time where large coefficients are good news.

Terry T

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