Dear Prof Carlson
Thank you very much.  As far as I can tell, factor.scores requires an object 
from class grm, itm, rason, or tpm; which I think are part of the irt package 
with which I am unfamiliar.
I had used the psych package to do the following factor analysis:
fa.11factors.rawdata <- fa(WISDMrawdataframe,nfactors=11)
# WISDMrawdataframe has 37 columns and 2408 rows, and contain 1051 rows that 
are NA (having NA in this dataframe allows the raw data to have the same length 
as my vector of ID numbers so I can work out which participants the data belong 
to)
fa.11factors.rawdata$loadings #on the computer screen this gives me the 
loadings with column names    MR4    MR3    MR2    MR6    MR7    MR5    MR1    
MR8    MR10   MR9    MR11
fa.11factors.rawdata$scores # on the computer screen this gives me the scores 
with column names              [,1]       [,2]        [,3]       [,4]        
[,5]       [,6]       [,7]       [,8]         [,9]      [,10]       [,11]
Am I safe in assuming that the scores in the first column relate to the 
loadings in the column called MR4?  
If this is a safe assumption, then I can work out which factor the scores 
relate to, by looking at which items load onto MR4    MR3    MR2    MR6    MR7  
  MR5    MR1    MR8    MR10   MR9    MR11
Thank you, I've taken your advice and cc'd this to Prof William Revelle
Thank you
Best wishes
Brent

-----Original Message-----
From: David L Carlson [mailto:dcarl...@tamu.edu] 
Sent: Thursday, 6 December 2012 10:33 a.m.
To: Brent Caldwell; 'r-help@R-project.org'
Subject: RE: [R] In factor analysis in the psych package, how can I work out 
which factors the columns in $scores relate to? How do I know what each of the 
scores is scoring?

Without seeing what options you have specified in your call to fa(), it is not 
possible to answer the question. There are detailed discussions in ?fa and 
?factor.scores in the psych package, but for the final word you should probably 
contact the package maintainer: 

Package: psych
Version: 1.2.8
Date: 2012-08-08
Title: Procedures for Psychological, Psychometric, and Personality
        Research
Author: William Revelle <reve...@northwestern.edu>
Maintainer: William Revelle <reve...@northwestern.edu>

----------------------------------------------
David L Carlson
Associate Professor of Anthropology
Texas A&M University
College Station, TX 77843-4352

> -----Original Message-----
> From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- 
> project.org] On Behalf Of Brent Caldwell
> Sent: Wednesday, December 05, 2012 2:53 PM
> To: r-help@R-project.org
> Subject: [R] In factor analysis in the psych package, how can I work 
> out which factors the columns in $scores relate to? How do I know what 
> each of the scores is scoring?
> 
> Hi
> I have used fa() to perform a factor analysis of a psychological 
> battery which is thought to have 11 factors.  I can identify which 
> factors the loadings relate to easily enough because I can see which 
> items are loading onto each of the columns in the $loading output.
> However, how can I identify which items or loadings are being used to 
> create each of the columns in the $scores output?  I have used 
> generalised linear models which have shown that some of the scores are 
> significant predictors of treatment outcome, but I can't work out 
> which of the 11 factors they are scoring?
> 
> when I export to csv the $loadings I get the following columns in this
> order:
>  MR4, MR3, MR2, MR6, MR7, MR5, MR1, MR8, MR10, MR9, MR11
> 
> When I export to csv the $scores I get the following columns in this
> order:
> V1, V2, V3, V4, V5, V6, V7, V8, V9, V10,V11
> 
> Are the scores in the column V1 derived from the loadings in column 
> MR1 ?
> Or are the scores in the first column of $scores (ie V1) derived from 
> the loadings in the first column of $loadings (ie MR4)?
> 
> Thank you very much for your guidance, and your patience with my 
> confusion Best wishes Brent
> 
> 
> Brent Caldwell, MBChB, DPH, MPH.
> Research Fellow
> Department of Medicine
> University of Otago, Wellington
> New Zealand
> U  brent.caldw...@otago.ac.nz
> b  04 918 6041
>    021 87 22 64
>   23a Mein Street, PO Box 7343, Newtown, WELLINGTON 6021, NEW ZEALAND
> brent.ower.caldwell
>   Zonnic study
> 
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