On 05.05.2013 14:20, shaqifahsani wrote:
Hi, I am very new to R. I am planning to plot a dendrogram from a binary file but received error after running it. I retrieved the code from the Internet and customized it accordingly... Error: Error in plot.window(...) : need finite 'xlim' values Can you explain why and what should I do... Thank you :)
Please see the positng guide that asks for reproducible code.Yours is not since we have no "J:/research/source/treePhone_binary.csv".
Best, Uwe Ligges
code: # load required libraries library(cluster) # clustering functions library(ape) # plotting # retrieve csv data treePhone <- read.csv("J:/research/source/treePhone_binary.csv") # combine into single data.frame df_treePhone <- data.frame(treePhone) d_treePhone <- daisy(df_treePhone) # perform divisive hierarcical clustering for dendrogram creation di_treePhone.diana <- diana(d_treePhone) # convert object into 'phylo' class for plotting p_treePhone.phylo <- as.phylo(as.hclust(di_treePhone.diana)) # plot dendrogram representation, annotated with the same labels plot(p_treePhone.phylo) [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.