Dear Thierry,
Thank you for your help. My code now works the way I wanted it to.
To other readers out there, I think the reason why the two functions work
differently is because extend_limits only ensures that the axis includes the
coordinates supplied, and does not guarantee that limits will be the
coordinates you supplied to the function (they might extend further in some
graphs like the heatmap)
Thierry, if any of the above is wrong or incomplete, feel free to correct me or
add more details.
John Clow
UCSB Student
________________________________________
From: ONKELINX, Thierry [thierry.onkel...@inbo.be]
Sent: Friday, July 26, 2013 1:03 AM
To: John W. Clow; r-help@r-project.org
Subject: RE: GGplot 2 – cannot get histogram and box plot axis to match.
Dear John,
Use xlim() and ylim() instead of expand_limits()
library(ggplot2)
#sample data from ggplot2
data(Cars93, package = "MASS")
dataSet <- Cars93
#variables to calculate the range to extend the axis dataVector <-
unlist(dataSet[,"MPG.city"])
dataRange <- diff(range(dataSet$MPG.city))
graphRange <- c(min(dataSet$MPG.city) - dataRange/5,
max(dataSet$MPG.city) + dataRange/5)
#making the box plot
theBoxPlot <- ggplot(dataSet,aes_string(x = "MPG.city", y = "MPG.city"))
theBoxPlot <-
theBoxPlot + geom_boxplot() + coord_flip() + ylim(limits = graphRange)
print(theBoxPlot)
#making the histogram
thePlot <- ggplot(dataSet,aes_string(x = "MPG.city"))
thePlot <- thePlot + geom_histogram() + xlim(graphRange)
print(thePlot)
ir. Thierry Onkelinx
Instituut voor natuur- en bosonderzoek / Research Institute for Nature and
Forest
team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance
Kliniekstraat 25
1070 Anderlecht
Belgium
+ 32 2 525 02 51
+ 32 54 43 61 85
thierry.onkel...@inbo.be
www.inbo.be
To call in the statistician after the experiment is done may be no more than
asking him to perform a post-mortem examination: he may be able to say what the
experiment died of.
~ Sir Ronald Aylmer Fisher
The plural of anecdote is not data.
~ Roger Brinner
The combination of some data and an aching desire for an answer does not ensure
that a reasonable answer can be extracted from a given body of data.
~ John Tukey
-----Oorspronkelijk bericht-----
Van: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] Namens
John W. Clow
Verzonden: donderdag 25 juli 2013 20:03
Aan: r-help@r-project.org
Onderwerp: [R] GGplot 2 – cannot get histogram and box plot axis to match.
Problem:
I am trying to get the histogram and box plot x axis to match. I’ve tried using
the expand_limits function to make the axis match but that didn’t make the axis
match. The histogram’s axis are still consistently larger than the ones for the
box plot (though the function did help). Does anyone have a suggestion as to
what I should do instead?
Background:
I am building a Shiny app that displays a histogram below a bar chart for a set
of data that a user uploads to the app. If you want to see the app, go here
http://spark.rstudio.com/jclow/Archive20130725HistogramApp/
To run the app, select “Use Sample Data” , then select “MPG.city” under choose
a column, then finally select box plot.
Sample code:
Below is a snippet of my code to demonstrate the problems I have.
library(ggplot2)
#sample data from ggplot2
data(Cars93, package = "MASS")
dataSet <- Cars93
#variables to calculate the range to extend the axis dataVector <-
unlist(dataSet[,"MPG.city"])
dataRange <- max(dataVector) - min(dataVector)
graphRange <- c(min(dataVector) - dataRange/5,
max(dataVector) + dataRange/5)
#making the box plot
theBoxPlot <- ggplot(dataSet,aes_string(x = "MPG.city",y = "MPG.city"))
theBoxPlot = theBoxPlot + geom_boxplot() + expand_limits(y= graphRange) +
coord_flip()
print(theBoxPlot)
#making the histogram
thePlot <- ggplot(dataSet,aes_string(x = "MPG.city")) thePlot <-thePlot +
geom_histogram() + expand_limits(x= graphRange)
print(thePlot)
Thank you for taking the time to read this.
John Clow
UCSB Student
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