Hello!
I have just installed R on an Ubutnu machine (13.04) and keep getting the
following:
erin@erin-Lenovo-IdeaPad-Y480:~$ R
/usr/bin/R: line 236: /usr/lib/R/etc/ldpaths: No such file or directory
R version 3.0.1 (2013-05-16) -- "Good Sport"
Copyright (C) 2013 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> install.packages("pbdMPI",depen=TRUE)
Installing package into /home/erin/lib/R/library
(as lib is unspecified)
--- Please select a CRAN mirror for use in this session ---
also installing the dependency rlecuyer
trying URL '
http://cran.revolutionanalytics.com/src/contrib/rlecuyer_0.3-3.tar.gz'
Content type 'application/x-gzip' length 11756 bytes (11 Kb)
opened URL
==================================================
downloaded 11 Kb
trying URL '
http://cran.revolutionanalytics.com/src/contrib/pbdMPI_0.1-8.tar.gz'
Content type 'application/x-gzip' length 417547 bytes (407 Kb)
opened URL
==================================================
downloaded 407 Kb
/usr/lib/R/bin/R: line 140: /usr/lib/R/etc/ldpaths: No such file or
directory
/usr/lib/R/bin/R: line 236: /usr/lib/R/etc/ldpaths: No such file or
directory
Error in file(con, "r") : cannot open the connection
Calls: <Anonymous> -> sub -> grep -> readLines -> file
In addition: Warning message:
In file(con, "r") :
cannot open file '/usr/lib/R/etc/Makeconf': No such file or directory
/usr/lib/R/bin/R: line 140: /usr/lib/R/etc/ldpaths: No such file or
directory
/usr/lib/R/bin/R: line 236: /usr/lib/R/etc/ldpaths: No such file or
directory
Error in file(con, "r") : cannot open the connection
Calls: <Anonymous> -> sub -> grep -> readLines -> file
In addition: Warning message:
In file(con, "r") :
cannot open file '/usr/lib/R/etc/Makeconf': No such file or directory
The downloaded source packages are in
/tmp/RtmpAtAxNL/downloaded_packages
Warning messages:
1: In install.packages("pbdMPI", depen = TRUE) :
installation of package rlecuyer had non-zero exit status
2: In install.packages("pbdMPI", depen = TRUE) :
installation of package pbdMPI had non-zero exit status
>
I uninstalled it, deleted the /etc/R and /usr/lib/R directories, and
re-installed. (Actually, I followed that process twice).
I'm still stuck. Does anyone have any suggestions, please?
Thanks,
Erin
--
Erin Hodgess
Associate Professor
Department of Computer and Mathematical Sciences
University of Houston - Downtown
mailto: erinm.hodg...@gmail.com
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