> To: [EMAIL PROTECTED]> From: [EMAIL PROTECTED]> Date: Fri, 16 May 2008
> 17:55:26 +0200> Subject: [R] heatmap on pre-established hclust output?> >
> Hi,> > Can someone please guide me towards how to produce "heatmap" output
> from the> output of "hclust" run prior to the actual "heatmap" call? I have
> some> rather lengthy clustering going on and tweeking the visual output> with
> "heatmap" recalculating the clustering every time is not feasible.> > Thanks,
> Joh
I can't say that i have actually tackled this, but I have some experience with
the functions you mentioned. Heatmap takes an hclustfun function parameter.
You can create a custom clustering function. I don't believe there is a rule
that says you have to do actual work in that function call. Look at just
returning the results of your more complicated clustering in that call without
actually doing the calculations.
Jeremiah Rounds
Graduate Student
Utah State University
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