> On Nov 27, 2015, at 11:27 AM, David Winsemius <dwinsem...@comcast.net> wrote: > >> >> On Nov 26, 2015, at 4:59 PM, Margaret Donald <merricks.merri...@gmail.com> >> wrote: >> >> 1. Despite being in R with administrative rights the library "rjags" loads >> in a temporary location. >> >>> install.packages("rjags", dependencies=TRUE, >> + lib= "C:/Users/Margaret Donald/Documents/R/win-library/3.2") >> trying URL 'https://cran.r-project.org/bin/windows/contrib/3.2/rjags_4-4.zip >> ' >> Content type 'application/zip' length 525871 bytes (513 KB) >> downloaded 513 KB >> >> package ‘rjags’ successfully unpacked and MD5 sums checked >> >> The downloaded binary packages are in >> C:\Users\Margaret >> Donald\AppData\Local\Temp\RtmpMzv76s\downloaded_packages > > That’s not an indication of an error. The installation process always does > that. > > >> #----------------------------------------------------------------------------------------------------------------- >> >> 2. Cannot find JAGS-4.0.0 which is in C;\programs\JAGS\JAGS-4.0.0. How do >> I get R to see JAGS-4.0.0 > > You might try to use Sys.setenv to create a properly directed JAGS_HOME > > Sys.setenv(JAGS_HOME=“C:\programs\JAGS\JAGS-4.0.0”)
Er ,,,, being a Mac user I forgot that this should have been (but I don’t really know whether `rjags` checks this environment variable, so am unsure if it was the correct notion in the first place):: Sys.setenv(JAGS_HOME=“C:\\programs\\JAGS\\JAGS-4.0.0”) Or: Sys.setenv(JAGS_HOME=“C:/programs/JAGS/JAGS-4.0.0”) — David. > > (I corrected the semi-colon.) >>> library(rjags) >> Error : .onLoad failed in loadNamespace() for 'rjags', details: >> call: fun(libname, pkgname) >> error: Failed to locate any version of JAGS version 4 >> >> The rjags package is just an interface to the JAGS library >> Make sure you have installed JAGS-4.x.y.exe (for any x >=0, y>=0) from >> http://www.sourceforge.net/projects/mcmc-jags/files > > I’m was having a perhaps similar problem on a Mac. The binary version 3-15 of > rjags installed today from CRAN was trying to access > /usr/local/lib/libjags.3.dylib, but since I have installed JAGS version 4.0.1 > installed from the SourceForge repository, there is no ligjags.3.dylib, but > instead there was only a /usr/local/lib/libjags.4.dylib > > > Going back to SourceForge and tracking down the older version of JAGS and > installing version 3.4.0 was successful in getting rjags to load correctly. I > suspect that with the release of JAGS v4 that there is some mismatch among > the various editions of rjags and JAGS. > > — > David >> >> Error: package or namespace load failed for ‘rjags’ >>> library(R2jags) >> Loading required package: rjags >> Error : .onLoad failed in loadNamespace() for 'rjags', details: >> call: fun(libname, pkgname) >> error: Failed to locate any version of JAGS version 4 >> >> The rjags package is just an interface to the JAGS library >> Make sure you have installed JAGS-4.x.y.exe (for any x >=0, y>=0) from >> http://www.sourceforge.net/projects/mcmc-jags/files >> >> Error: package ‘rjags’ could not be loaded >>> >> >> Regards, >> Margaret Donald >> -- >> Margaret Donald >> Post Doctoral researcher >> University of New South Wales >> margaret.don...@unsw.edu.au >> 0405 834 550 >> >> [[alternative HTML version deleted]] >> >> ______________________________________________ >> R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. > > David Winsemius > Alameda, CA, USA > > ______________________________________________ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. David Winsemius Alameda, CA, USA ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.