Just curious: do you get the same error message, or is it a problem with my specific version/computer???
2015-12-10 15:28 GMT+07:00 Alexander Moßbrucker <islandelepha...@gmail.com>: > I am not surve, as I cannot start the crashed computer I used before. I > guess it might be the same versions, I installed them on my crashed > computer in October, and now reinstalled them on my new computer in > December, thus only 2-3 months difference. > > > > > <https://www.avast.com/lp-safe-emailing?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> > This > email has been sent from a virus-free computer protected by Avast. > www.avast.com > <https://www.avast.com/lp-safe-emailing?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> > <#1518b0187e13409b_DDB4FAA8-2DD7-40BB-A1B8-4E2AA1F9FDF2> > > 2015-12-10 15:04 GMT+07:00 PIKAL Petr <petr.pi...@precheza.cz>: > >> Hi >> >> >> >> Reply to the list too, somebody could answer your question better than >> myself. >> >> >> >> You say that it is the same script. OK. But is it also the same version >> of R and ctmm? >> >> >> >> Cheers >> >> Petr >> >> >> >> *From:* Alexander Moßbrucker [mailto:islandelepha...@gmail.com] >> *Sent:* Thursday, December 10, 2015 8:50 AM >> *To:* PIKAL Petr >> *Subject:* Re: [R] problems with plotting/graphics after changing my >> computer >> >> >> >> Hi Petr, >> >> thank you for your quick reply. I have the script now attached as word >> doc, hope that is readable now. >> >> There must be another problem, because I could plot the AKDE very easily >> on my old computer, using exactly the same script and data and the same >> commands and all....thus it is very strange if suddenly on my new computer >> R doesn't recognize the command any more.... >> >> I also attached the ctmm PDF, the example is directly taken from this >> PDF, from the section "akde" >> >> >> >> Best, Alex >> >> >> >> >> <https://www.avast.com/lp-safe-emailing?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> >> >> This email has been sent from a virus-free computer protected by Avast. >> www.avast.com >> <https://www.avast.com/lp-safe-emailing?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> >> >> >> >> 2015-12-10 14:23 GMT+07:00 PIKAL Petr <petr.pi...@precheza.cz>: >> >> Hi >> >> 1. Do not post in HTML. Your mail is corrupted and almost unreadable. >> 2. As far I I could decipher it, your plot call is >> >> plot(cilla,AKDE=KD2) >> >> According to docs the plot function does not have parameter called AKDE >> >> plot(x, CTMM=NULL, UD=NULL, level.UD=0.95, level=0.95, DF="CDF", >> col="red", >> col.level="black", col.DF="blue", col.grid="grey", fraction=1, add=FALSE, >> xlim=NULL, >> ylim=NULL, ...) >> >> but I believe that akde result shall be transferred to UD parameter. >> >> UD Optional UD object such as from the output of akde or list of such >> objects >> >> So your plot shall be called >> >> plot(cilla, UD=KD2) >> >> I do not have any experience with ctmm though, so I may completely miss >> the point. But if I am right, you could find all this in help page the same >> way as I did and probably quicker. >> >> Cheers >> Petr >> >> >> > -----Original Message----- >> > From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of >> > Alexander Moßbrucker >> > Sent: Thursday, December 10, 2015 7:47 AM >> > To: r-help@r-project.org >> > Subject: [R] problems with plotting/graphics after changing my computer >> > >> > Dear all, >> > >> > I have worked on AKDEs using the package ctmm. Because my old computer >> > often crashed, I bought a new one and reinstalled all the software, >> > including r. >> > >> > All seemed to work fine, but when I wanted to plot several results I >> > encountered error messages. >> > >> > I tried many different plots, some plots work, others not, I could't >> > find >> > out why. The error message is always " ..... is not a graphical >> > parameter". >> > I am using exactly the same r script and packages as before on my old >> > computer. >> > >> > Would be great if you could help me with this....., best, Alex >> > >> > Please find below an example from the ctmm package: >> > >> > > # Load package and data> library(ctmm)> data(buffalo)> cilla <- >> > buffalo[[1]]> # Fit a continuous-velocity model with tau ~ c(10 days, 1 >> > hour)> # see help(variogram.fit)> m2 <- ctmm(tau=c(10*24*60^2,60^2))> >> > M2 <- ctmm.fit(cilla,m2)> # Compute akde object> KD2 <- akde(cilla,M2)> >> > # Plot data with AKDE contours> plot(cilla,AKDE=KD2)Warning messages:1: >> > In plot.window(...) : "AKDE" is not a graphical parameter2: In >> > plot.xy(xy, type, ...) : "AKDE" is not a graphical parameter3: In >> > axis(side = side, at = at, labels = labels, ...) : >> > "AKDE" is not a graphical parameter4: In axis(side = side, at = at, >> > labels = labels, ...) : >> > "AKDE" is not a graphical parameter5: In box(...) : "AKDE" is not a >> > graphical parameter6: In title(...) : "AKDE" is not a graphical >> > parameter7: In plot.xy(xy.coords(x, y), type = type, ...) : >> > "AKDE" is not a graphical parameter >> > >> > >> > >> > >> > >> >> >> >> ------------------------------ >> Tento e-mail a jakékoliv k němu připojené dokumenty jsou důvěrné a jsou >> určeny pouze jeho adresátům. >> Jestliže jste obdržel(a) tento e-mail omylem, informujte laskavě >> neprodleně jeho odesílatele. 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