Hello everybody,

I am a student at Unibas and I am trying to run a two sample t-test on a matrix 
which is a
255*13 matrix (see attachment). I want to run the t-test, row-wise, with the
columns 3:7 being a part of the first group and columns
8-12 being a part of the second group.

I tried running something like (temp.matrix being my 255*13
matrix)

t.test(temp.matrix[,3:7],temp.matrix[,8:12],paired=TRUE)

or somthing like

as.numeric(t.test(temp.matrix[,3:7],temp.matrix[,8:12],paired=TRUE)[[1]])
so as to only capture the t-value alone and

and I get a result for the whole matrix instead of a row-wise
result.

I really hope you can help me

Thanks

Vincenzo
ID      Gene    Ctrl_1  Ctrl_2  Ctlr_3  Ctrl_4  Ctrl_5  Treat_1 Treat_2 Treat_3 
Treat_4 Treat_5 miRNA
1600012H06Rik   6848806 4.053097        4.682418        4.992589        
5.244584        4.774276        4.709481        4.96773 4.778008        
5.040837        4.790709        miR-200a-3p
1700019N19Rik   6874079 1.593332        1.292103        1.512545        
1.715567        1.476307        1.388066        1.619759        1.338901        
1.467929        1.466803        miR-155-5p
1700025G04Rik   6763059 5.370431        6.102304        4.828034        
6.053643        5.183033        4.403051        4.926512        4.656887        
5.019105        4.548957        miR-200a-3p
1810011O10Rik   6981091 6.547937        6.347024        6.441714        
6.417965        7.06705 5.288563        6.07901 5.753048        5.442022        
5.084001        miR-155-5p
2310035C23Rik   6752068 3.825624        3.735807        3.54262 4.261669        
3.760546        3.344192        3.724253        4.218188        4.576074        
4.083278        miR-155-5p
2310057M21Rik   6971606 2.656656        3.511841        2.687459        
3.371114        3.251817        3.042373        3.197478        3.104968        
3.043544        3.163914        miR-200a-3p
2510009E07Rik   6844530 5.800325        6.42577 5.7668  5.730662        
5.700424        5.400055        5.461157        5.342279        5.421712        
5.526397        miR-155-5p
2510009E07Rik   6844530 5.800325        6.42577 5.7668  5.730662        
5.700424        5.400055        5.461157        5.342279        5.421712        
5.526397        miR-200a-3p
3110002H16Rik   6858895 4.547934        4.338857        4.307914        
4.440886        4.32409 4.261136        4.295564        4.268925        
4.380961        4.205863        miR-155-5p
3830406C13Rik   6816967 4.545667        4.599458        4.132103        4.38886 
4.41772 4.083843        3.997091        4.444016        4.674428        
4.479012        miR-200a-3p
4921524J17Rik   6983927 5.821286        6.031273        5.723837        
6.164541        5.996535        5.762924        5.26152 5.78468 6.034521        
5.654569        miR-200a-3p
4930452B06Rik   6822485 2.079748        2.034166        2.023635        
1.772746        2.026704        1.714615        1.874965        1.916288        
2.02017 1.695061        miR-200a-3p
4932411E22Rik   6790674 1.855168        1.813021        1.805293        
1.941948        1.880074        1.73792 2.007626        1.647354        1.63846 
1.954501        miR-155-5p
4933411K20Rik   6975889 4.912063        4.850317        4.548501        
5.309704        5.052458        4.556008        4.441203        5.146813        
5.168824        5.134651        miR-200a-3p
5730596B20Rik   6946238 1.868883        1.608458        1.839854        
1.842316        1.969393        1.962821        1.629592        2.093951        
1.643391        1.757382        ÊmiR-122-5p
Acsl4   7019867 7.708411        7.510239        7.505104        7.897287        
7.610579        7.385438        7.615133        7.66394 7.403194        
7.461257        miR-200a-3p
Agtrap  6926872 2.282634        2.775566        2.33726 2.917997        
2.298824        2.311636        1.752051        1.939863        2.115742        
1.979919        miR-155-5p
Ak2     6917270 8.320667        8.363815        8.323075        7.235466        
8.508484        8.763313        8.86618 8.398002        8.130665        
8.197979        miR-200a-3p
Aloxe3  6781988 1.841544        1.76754 1.939353        1.821221        
1.954336        1.673903        1.856271        1.982049        1.74662 
1.879063        miR-200a-3p
Ankrd13c        6902789 4.500754        4.605805        4.391511        
5.254901        4.773527        4.5101  4.594759        4.795172        
4.929744        4.779805        ÊmiR-122-5p
Ano6    6832923 4.422519        5.181165        4.119408        4.742452        
4.682191        3.406001        3.450612        3.784264        4.143068        
3.494661        miR-200a-3p
Ap3d1   6775392 7.139699        7.172913        7.147912        7.587961        
7.066946        6.860711        7.060278        7.143149        6.91033 
7.095939        miR-155-5p
Apbb2   6938797 5.038412        5.188143        4.779464        4.839489        
4.865593        4.670611        4.514815        4.760385        4.802538        
4.799211        miR-200a-3p
Astn1   6754403 1.801276        1.725545        1.792893        1.723811        
1.815169        1.666285        1.694785        1.771218        1.694209        
1.766107        miR-200a-3p
Astn2   6922382 2.537551        2.700618        2.525914        2.525836        
2.319832        2.121058        2.368564        2.385448        2.514646        
2.453313        miR-155-5p
Atp11a  6974113 5.352429        5.873187        5.963297        4.530801        
5.508359        4.104031        4.639043        5.133249        4.928728        
4.95326 ÊmiR-122-5p
Atp1b1  6763706 7.864003        7.899951        7.935221        8.906133        
7.421212        7.249035        7.946365        7.620004        7.542477        
7.430905        ÊmiR-122-5p
Atp6v1a 6845914 7.331837        7.669775        7.076793        6.948604        
6.659146        6.57619 6.657272        6.593287        6.854872        
6.710169        miR-200a-3p
Atpaf1  6916504 2.782611        2.878455        2.544638        2.782204        
2.690728        2.278086        2.75051 3.075184        2.737584        
2.760091        miR-200a-3p
B230219D22Rik   6807263 7.127925        7.022699        7.068948        
7.297543        7.156825        6.863883        7.248012        7.187609        
7.129886        7.012433        miR-200a-3p
Bach1   4502353 1.1431  1.863361        1.955899        1.826922        
1.775938        1.742127        1.500795        1.19523 1.91476 1.789218        
miR-155-5p
Bach1   6842940 5.453053        5.503675        4.703201        6.009592        
5.133264        4.78529 4.923391        4.906662        4.632376        
4.689655        miR-155-5p
Bach2   6912477 2.417046        2.532018        2.448063        2.510767        
2.629408        2.632238        3.440263        3.104887        3.448952        
3.710173        ÊmiR-122-5p
Bnip2   6990243 6.663853        7.507619        7.078977        7.053546        
7.097666        6.572706        7.258031        6.958776        7.413326        
6.823814        miR-200a-3p
C030039L03Rik   6959331 1.777022        1.978271        1.6163  1.329191        
1.458576        1.60692 1.891282        3.153624        2.647521        
1.970975        miR-200a-3p
C030039L03Rik   6959321 1.855336        1.69419 1.759007        1.703971        
1.927044        1.566897        1.677961        1.560739        1.506201        
1.764443        miR-200a-3p
Cacna2d1        6928909 1.540067        1.780241        1.527152        
1.635313        1.759857        1.546421        1.527903        1.510794        
1.543162        1.542736        miR-155-5p
Canx    4748759 9.726692        9.830774        9.526095        9.107796        
9.553418        9.385071        9.632965        9.994068        9.930243        
9.630861        miR-200a-3p
Canx    4980682 1.663626        2.032705        1.590677        2.670017        
1.165425        1.89694 1.137758        1.505109        1.985962        
1.855515        miR-200a-3p
Canx    5113639 10.57173        10.68427        10.80906        10.16471        
10.7807 10.84865        10.86643        10.98642        10.90621        
10.79516        miR-200a-3p
Canx    4712069 10.36031        10.29655        9.960876        9.691511        
10.1727 9.910386        10.0963 10.57873        10.31934        9.967905        
miR-200a-3p
Canx    5190858 8.151455        8.247134        8.019732        7.728179        
8.17235 7.300641        7.998319        9.05146 8.391647        7.937603        
miR-200a-3p
Canx    4535774 8.961654        9.071115        8.087836        8.206382        
8.706912        8.222894        8.817848        9.897801        9.177096        
8.579581        miR-200a-3p
Canx    4654308 9.954693        10.30855        9.791015        9.692408        
10.20245        9.894808        9.979242        10.43228        10.21077        
9.765749        miR-200a-3p
Canx    5383305 9.52844 9.728929        9.600091        8.892024        
9.643748        9.32377 9.464764        9.666973        9.733624        9.33461 
miR-200a-3p
Canx    5024196 9.52361 9.630827        9.567713        9.073224        
9.411782        9.386931        9.463646        10.02401        9.945381        
9.560474        miR-200a-3p
Canx    4950937 1.809833        1.845163        1.837769        2.429174        
2.090488        3.67495 1.778532        2.180268        2.40528 1.94362 
miR-200a-3p
Canx    5159841 8.64059 8.915704        8.493868        8.173158        8.73706 
8.508184        8.581998        8.565644        8.507416        8.284592        
miR-200a-3p
Canx    4882060 9.466887        9.377037        9.038711        9.210921        
9.472116        8.508115        8.894751        9.954732        10.0207 
9.358618        miR-200a-3p
Canx    4731624 2.639741        1.977011        1.072044        1.849438        
1.960213        1.218783        1.133014        1.252832        0.8969274       
1.336778        miR-200a-3p
Canx    5509742 11.0672 11.20622        10.9859 10.33258        10.7601 
10.71014        10.89269        11.0556 11.01794        10.63828        
miR-200a-3p
Canx    4370354 10.44052        10.71584        10.62503        9.883556        
10.73018        10.68888        10.83985        10.567  10.53312        
10.79064        miR-200a-3p
Canx    5059581 9.502859        9.930318        9.430253        8.795406        
9.518232        9.44805 9.292469        9.15167 9.347548        9.429875        
miR-200a-3p
Canx    5573185 11.3848 11.43721        11.29574        10.82414        
11.47318        11.33831        11.41538        11.52036        11.37516        
11.31548        miR-200a-3p
Canx    5256280 1.230616        1.652682        0.8821101       1.70705 
1.433148        1.20705 1.24255 1.606847        1.659427        1.364035        
miR-200a-3p
Canx    4854644 9.066492        9.092334        9.084355        8.548103        
9.308208        9.303092        9.029757        9.699157        9.250376        
9.214007        miR-200a-3p
Canx    4763878 10.78853        10.69625        10.27663        9.876543        
10.73086        10.43668        10.63562        10.72259        10.79089        
10.47432        miR-200a-3p
Canx    4989772 10.69488        10.75263        10.46954        10.12854        
10.67462        10.5782 10.50565        10.9277 11.07048        10.64813        
miR-200a-3p
Canx    5066712 9.723756        9.521495        9.414859        8.859447        
9.519445        9.515736        9.492548        9.958344        9.742439        
9.353023        miR-200a-3p
Canx    4728482 4.653406        4.413812        4.328687        4.171988        
4.552914        4.337247        5.071694        4.89222 5.553979        
4.210671        miR-200a-3p
Canx    4963319 1.844753        2.710814        2.565976        2.866377        
3.117324        3.004535        3.148668        2.015927        2.411582        
2.657983        miR-200a-3p
Canx    4309360 9.75631 9.554364        9.548085        9.142392        
9.701873        9.313195        9.855002        9.905247        9.902972        
9.491823        miR-200a-3p
Canx    4579176 3.511232        1.798705        0.96527 1.812059        1.37259 
2.183592        1.600363        2.670863        3.050843        3.571661        
miR-200a-3p
Canx    4774327 1.809099        1.538966        1.307496        1.858808        
1.570827        2.026173        1.775707        1.474754        1.813616        
2.124551        miR-200a-3p
Canx    4696431 2.026146        1.342814        1.218214        1.293387        
1.195006        2.025313        1.438058        1.363342        1.741394        
1.221805        miR-200a-3p
Canx    6788020 10.18214        10.24565        10.0831 9.608234        
10.20262        10.05747        10.15117        10.43795        10.34779        
10.06275        miR-200a-3p
Canx    4971291 10.24435        10.42799        10.05572        9.644778        
10.25787        9.885063        10.1533 10.56099        10.48665        
10.15771        miR-200a-3p
Ccdc80  6841160 6.869754        7.83049 6.668419        7.105142        
6.635848        3.711743        3.713969        3.947798        4.651297        
3.84973 miR-200a-3p
Ccne2   6911682 1.565518        2.179217        1.189784        2.406642        
1.781539        1.610536        2.229653        1.485758        1.689134        
1.480521        miR-200a-3p
Cd247   6754799 1.949368        1.776486        1.854129        1.83215 
1.745086        1.674098        1.696914        1.931593        1.852712        
1.783701        miR-200a-3p
Cdc73   6762765 5.257089        5.524242        5.403139        6.671859        
5.83707 5.6594  5.627928        5.665674        5.819605        5.771224        
miR-155-5p
Cdh12   6829123 1.405074        1.26782 1.37412 1.345747        1.343629        
1.509781        1.300366        1.321831        1.263057        1.469124        
miR-155-5p
Cdk17   6769845 4.280916        4.355121        3.878414        4.621366        
4.161294        3.928732        4.050142        4.287446        4.417972        
4.075312        miR-200a-3p
Cds2    6881306 6.917879        7.175174        7.5573  7.573578        
7.368848        7.10922 7.220054        7.409817        7.492986        7.40738 
miR-200a-3p
Celf1   6879006 7.311199        7.391644        7.256037        7.520992        
7.407639        7.112923        7.363569        7.380431        7.272692        
7.247254        miR-200a-3p
Celf1   6879008 3.735715        4.1304  3.473942        4.692643        
3.703493        2.965903        3.503033        3.944448        3.982048        
4.435176        miR-200a-3p
Ciita   6839340 2.333907        2.488408        2.560938        2.23236 2.42568 
2.275449        2.385355        2.392566        2.447189        2.347763        
ÊmiR-122-5p
Clcn4-2 6972505 5.892568        5.825405        5.794319        6.268344        
6.014251        5.776665        5.853934        5.956696        6.053106        
5.877632        miR-200a-3p
Clic5   6850564 3.823985        3.398823        3.586614        2.790774        
3.275969        3.437418        3.332616        3.268564        3.417708        
3.365154        ÊmiR-122-5p
Cnot10  6999137 4.917636        4.709036        4.57981 4.958983        
4.612531        4.542471        4.766934        4.489283        4.783889        
4.783196        miR-155-5p
Cops3   6788702 6.468298        6.526148        6.416757        6.845239        
6.213883        6.364283        6.557213        6.789473        6.683005        
6.49588 miR-155-5p
Ctnna1  6860001 7.00617 7.257152        6.971393        7.405119        
7.247475        6.776397        7.011345        7.208685        7.147797        
6.989181        miR-200a-3p
Cyp7b1  6903454 7.264438        7.425224        8.046835        6.180998        
9.382842        10.5335 10.46624        10.15334        9.842529        
10.43762        miR-155-5p
Cyth1   6792638 5.558706        5.555351        5.187969        6.32804 
5.056575        5.300104        5.424888        5.104805        5.435297        
5.218919        miR-200a-3p
Cyth3   6935408 4.71325 5.412699        4.891496        5.372462        
4.746604        4.087874        4.221783        4.577815        4.521383        
4.155026        miR-200a-3p
D15Ertd621e     6830671 7.677894        7.559205        7.36357 7.722579        
7.404693        7.364308        7.559772        7.833519        7.731524        
7.674845        miR-200a-3p
D15Ertd621e     6830671 7.677894        7.559205        7.36357 7.722579        
7.404693        7.364308        7.559772        7.833519        7.731524        
7.674845        miR-155-5p
D1Ertd622e      6760911 5.065468        5.430731        5.209162        
6.240173        4.981236        3.905946        5.33147 4.192555        
4.575967        4.122252        miR-155-5p
D5Ertd579e      6937482 2.110525        2.423097        2.204242        
2.867432        2.654868        3.407297        2.571465        2.301886        
2.690655        2.561868        miR-155-5p
Dek     6812984 6.274996        6.379041        6.029084        6.583015        
6.149127        5.538852        5.575132        6.389058        6.533216        
6.207059        miR-200a-3p
Dhfr    6808948 6.908349        7.004239        6.628001        6.200965        
6.527137        6.092972        6.515657        7.018391        6.775407        
6.690785        ÊmiR-122-5p
Dmtf1   6936116 3.41891 3.546324        3.132974        4.433648        
3.589806        3.224735        3.291671        3.84465 4.092195        
3.613557        miR-155-5p
Dusp7   6992172 4.910748        5.454679        5.154142        4.863516        
5.035694        5.350731        5.09019 5.049176        4.802226        
4.695213        miR-155-5p
Dync1i1 6943889 1.628567        1.645487        1.729076        1.650195        
1.691571        1.655662        1.787188        1.612874        1.625922        
1.550911        miR-155-5p
Dync1i1 6943889 1.628567        1.645487        1.729076        1.650195        
1.691571        1.655662        1.787188        1.612874        1.625922        
1.550911        miR-200a-3p
E2f2    6917810 2.711719        2.596298        2.763073        2.366912        
2.736668        2.936607        2.9549  2.625052        2.420966        
2.673693        miR-155-5p
Ehd4    6890288 4.370452        4.643081        3.527919        3.88412 
3.335734        3.370556        3.076597        3.341574        3.407325        
3.462027        miR-200a-3p
Ehf     6889273 1.704716        1.792397        1.716357        1.686846        
2.129411        1.670814        1.615887        1.674088        1.4868  
1.701226        miR-155-5p
En2     6929517 2.088156        2.014745        1.750935        1.898182        
2.1278  1.710485        1.902757        1.747209        1.74293 1.983824        
miR-155-5p
Enah    6764694 1.69098 1.788864        1.658944        1.772498        
1.798904        1.600327        1.870511        1.658033        1.721679        
1.686219        miR-155-5p
Epha5   6939604 1.606266        1.633535        1.655515        1.540467        
1.670147        1.567515        1.669932        1.547408        1.593498        
1.519574        miR-200a-3p
Fam105a 6834560 2.557152        3.369034        2.548674        3.258337        
2.185156        2.054381        2.236478        1.917075        2.452523        
1.884692        miR-155-5p
Fam178a 6869973 2.832206        3.135604        2.573914        3.826618        
3.25082 3.014415        2.785699        2.901314        3.378959        
2.879741        miR-200a-3p
Fam63b  6996659 3.824703        3.443492        2.625587        4.410193        
3.148993        3.260302        2.990529        3.157619        3.336507        
2.885809        miR-200a-3p
Fbxl2   6999097 1.856888        1.756355        1.91286 1.867278        
1.723888        1.969723        1.927712        1.902514        1.762481        
1.853398        miR-155-5p
Fbxl2   6999097 1.856888        1.756355        1.91286 1.867278        
1.723888        1.969723        1.927712        1.902514        1.762481        
1.853398        miR-200a-3p
Fgd6    6769917 4.938801        4.858201        4.30613 5.231896        
5.069305        4.617646        5.258652        4.935171        5.355445        
4.753929        miR-200a-3p
Fgf7    6880900 1.382103        1.198104        1.604159        1.237197        
1.218775        1.218775        1.128111        1.257121        1.114077        
1.348969        miR-155-5p
Flt4    6780746 5.057462        5.122773        4.96712 5.947373        
5.042426        5.299245        5.258749        5.059853        5.252668        
4.990077        miR-200a-3p
Fst     6816226 3.054061        3.684497        3.337137        6.722399        
2.626799        2.706534        2.545146        3.159346        3.279118        
2.803792        miR-200a-3p
G6pc3   6784317 4.310756        4.225416        3.84375 3.941858        
3.830511        3.858849        3.610815        3.846489        3.821758        
3.913465        ÊmiR-122-5p
Gatad2b 6899339 6.399697        6.623754        6.298496        7.203628        
6.598255        6.408129        6.66983 6.741476        6.708051        6.70126 
miR-155-5p
Gatad2b 6899339 6.399697        6.623754        6.298496        7.203628        
6.598255        6.408129        6.66983 6.741476        6.708051        6.70126 
ÊmiR-122-5p
Gli3    6804974 1.680285        1.921498        1.56775 1.625175        
1.686273        1.624621        1.625612        1.655539        1.690034        
1.745309        miR-200a-3p
Gm3435  6848813 6.342253        6.257408        5.760795        5.926101        
6.14681 5.99778 6.100284        6.460595        6.472036        6.440644        
miR-200a-3p
Gm614   7018531 3.633739        4.582096        2.799857        3.654542        
3.203873        2.475255        2.635184        2.952668        2.805302        
2.587513        ÊmiR-122-5p
Gna13   6784783 7.029715        7.209441        6.864649        7.660263        
7.407793        6.696202        6.429847        6.976059        6.731907        
6.779229        miR-200a-3p
Gnas    6883737 4.881377        5.029954        5.030318        4.821813        
4.939106        4.872646        4.999744        5.110113        4.945703        
4.997643        miR-155-5p
Gnpda2  6938963 2.121145        2.570077        2.180924        2.552668        
2.04151 1.921476        1.929156        2.158183        2.206005        
1.991568        ÊmiR-122-5p
Golt1b  6950770 3.369193        4.149224        3.480693        3.417728        
3.828312        3.783336        3.874013        3.430379        3.659659        
3.776935        miR-200a-3p
Grin3a  6921569 1.53026 1.299035        1.539415        1.624749        
1.472808        1.516246        1.931913        1.413894        1.498846        
1.496987        miR-200a-3p
H1f0    6831858 7.754259        7.7149  7.709224        8.142483        
7.619014        7.123202        7.211235        7.702128        7.816606        
7.31759 ÊmiR-122-5p
Hhip    6983639 1.76953 1.896575        1.996627        1.974096        
2.096391        2.066603        2.121358        2.152223        2.124746        
2.098986        ÊmiR-122-5p
Hhip    6983639 1.76953 1.896575        1.996627        1.974096        
2.096391        2.066603        2.121358        2.152223        2.124746        
2.098986        miR-155-5p
Hic2    6839733 2.87392 2.880522        2.680935        2.967362        
2.964208        2.668077        2.976439        2.595741        2.886803        
3.177506        miR-200a-3p
Hipk3   6889330 7.489049        7.70191 7.506209        8.190207        
7.845593        7.610591        7.723487        7.715121        7.843527        
7.624559        miR-200a-3p
Hmg20a  6989319 4.203623        4.581295        4.152747        4.971177        
4.377337        4.269454        4.156856        4.392022        4.627483        
4.389939        miR-200a-3p
Hnrnpu  6764481 8.437292        8.522628        8.281106        9.219698        
8.419732        8.231329        8.300024        8.68155 8.738587        
8.390923        ÊmiR-122-5p
Hs2st1  6910088 3.643659        3.76612 3.957302        3.64969 3.515458        
3.227875        3.596147        3.611159        3.60082 3.63987 miR-200a-3p
Il1a    6890837 4.383216        5.084038        4.011237        6.01354 
4.208618        3.262346        4.026999        3.713612        4.207117        
4.172045        miR-200a-3p
Inpp5d  6751344 3.336089        3.88379 3.213583        3.964971        
2.984635        2.693533        2.743218        2.716574        2.746261        
2.700605        miR-155-5p
Jam3    6994157 2.366658        2.565631        2.506954        2.61563 
3.020844        2.43357 2.577368        2.353667        2.378553        
2.286599        miR-200a-3p
Khdrbs1 6925595 5.552309        5.557338        5.596306        5.987515        
5.510802        5.267346        5.282897        5.766776        5.661589        
5.493565        ÊmiR-122-5p
Kif1c   6782149 2.713527        3.1983  3.316313        4.080337        
3.696391        3.542684        2.836524        3.801769        4.804065        
3.471902        miR-200a-3p
Kif1c   6782147 6.843976        6.923948        6.917436        7.156826        
6.943635        6.982061        7.22494 7.274264        7.212999        
7.053599        miR-200a-3p
Kif3a   6780986 3.052502        3.619671        3.298978        3.973685        
3.241153        2.763144        2.99023 3.358687        3.592915        
3.096532        miR-200a-3p
Kif5b   6863158 7.026017        7.139065        6.8295  7.538515        
7.129826        6.924623        7.139635        7.226394        7.379749        
7.163043        miR-200a-3p
Kif5b   6863158 7.026017        7.139065        6.8295  7.538515        
7.129826        6.924623        7.139635        7.226394        7.379749        
7.163043        ÊmiR-122-5p
Klf12   6826975 5.836629        5.698586        5.63494 6.041385        5.49933 
5.380757        5.361418        6.527956        6.254181        6.140866        
miR-200a-3p
Kras    6958216 5.668024        6.070047        5.921894        6.18224 
6.238111        5.582446        5.98421 6.61968 6.511187        6.285696        
miR-155-5p
Lcor    6869724 5.407516        5.437672        5.0215  6.094102        
5.712093        5.283413        5.439684        5.53129 5.597785        
5.201736        miR-155-5p
Lpar3   6902185 2.148615        2.073343        2.50805 1.966798        
1.966798        2.114744        2.207503        2.164952        2.217645        
2.186088        miR-200a-3p
Lrp1b   6886244 1.433477        1.418255        1.427243        1.358257        
1.43667 1.443174        1.466837        1.372056        1.385188        
1.435828        miR-155-5p
Lrrc57  6890308 5.502719        5.682024        5.568152        5.69576 
5.297235        5.622638        5.555809        5.684543        5.897768        
6.092875        miR-200a-3p
Lypla1  6747308 8.38312 8.440893        8.587224        8.371603        
8.597293        8.304424        8.486094        9.112779        8.79579 
8.485055        miR-200a-3p
Mafb    6892699 6.602479        6.029889        6.968633        7.611772        
5.943508        6.250871        6.846545        5.191919        4.4563  
5.963467        miR-155-5p
Mbnl1   6897864 8.552079        8.22963 8.005711        8.370213        
8.015437        8.216627        8.443465        8.592168        8.328003        
8.221589        miR-200a-3p
Mbnl1   6897864 8.552079        8.22963 8.005711        8.370213        
8.015437        8.216627        8.443465        8.592168        8.328003        
8.221589        ÊmiR-122-5p
Mdm1    6771050 2.149735        2.304404        2.275916        2.582271        
2.299309        2.356421        2.359864        2.13275 2.271787        
2.134264        miR-200a-3p
Med13l  6933852 4.025175        4.23268 4.050857        5.448469        
4.442129        3.819719        4.188659        4.286628        4.222425        
4.182001        miR-200a-3p
Med14   7015697 6.33041 6.593896        6.152874        6.412561        
6.197105        6.107085        6.41099 6.439926        6.414947        
6.249133        miR-155-5p
Meis2   6889978 3.137018        3.28008 3.339156        3.613467        
3.122484        2.928714        2.96844 3.450512        3.525594        
3.117817        ÊmiR-122-5p
Mier3   6810209 5.974128        6.147459        5.724768        7.065368        
6.149741        6.082787        5.98922 6.466049        6.347757        6.0787  
miR-155-5p
Mier3   6810209 5.974128        6.147459        5.724768        7.065368        
6.149741        6.082787        5.98922 6.466049        6.347757        6.0787  
miR-200a-3p
Mlec    6941257 6.821215        6.772112        6.466398        5.962325        
6.416396        5.964916        6.710516        5.726735        6.409726        
6.429803        miR-200a-3p
Mlec    6941261 8.315442        8.577666        8.330438        6.934308        
8.32353 8.343062        8.687622        8.152437        7.886281        
8.383669        miR-200a-3p
Ms4a6b  6868105 2.483192        3.670324        2.727398        4.643965        
2.138571        1.906811        2.068574        1.838631        2.125341        
1.977205        ÊmiR-122-5p
Ms4a6c  6868098 4.7935  6.097902        4.730594        6.815007        
3.958319        2.541386        3.39688 2.976937        3.380178        
2.319825        ÊmiR-122-5p
Msr1    6981823 6.126606        7.664814        6.224107        6.44451 
5.150274        4.528659        5.137617        5.461119        5.818417        
5.030759        miR-155-5p
Myo10   6829277 6.613774        6.773971        6.350627        6.383898        
6.604426        5.934534        5.902703        6.326344        6.417977        
6.185778        miR-155-5p
Nacc1   6983869 4.211602        4.640492        4.399724        4.621154        
4.215753        4.204179        4.283978        4.89115 4.438277        
3.932914        ÊmiR-122-5p
Necap1  6949717 7.111703        7.094135        6.756021        7.081926        
7.115823        7.21632 7.173296        7.12536 7.320491        7.239527        
miR-155-5p
Nfasc   6762236 2.458784        2.503756        2.543943        2.323521        
2.489069        2.59651 2.315566        2.394143        2.364304        
2.316151        miR-200a-3p
Ngef    6760446 5.173948        5.285733        5.190569        5.154515        
4.91958 5.371711        5.155133        5.145978        5.171095        
4.962413        miR-155-5p
Nme1    6790902 5.907176        6.01123 5.501188        4.685753        
5.464594        5.503215        5.767732        5.696039        5.616567        
5.839454        miR-200a-3p
Nrip3   6970384 1.718673        1.883102        1.713346        1.727566        
1.850618        1.922251        1.668476        1.64024 1.911231        
1.705342        miR-200a-3p
Ocln    6815539 6.406456        5.887925        5.502091        6.892957        
6.221852        5.601136        5.305775        6.21474 6.803676        
5.521626        ÊmiR-122-5p
Olig3   6766333 1.815919        1.727573        2.019689        1.544304        
1.824261        1.848392        1.639266        1.875991        1.72833 
2.017503        miR-200a-3p
Olr1    6957412 1.350689        1.428266        1.424734        1.367204        
1.430271        1.545983        1.337285        1.291218        1.411617        
1.439708        miR-200a-3p
Osbpl6  6878344 1.67901 1.666505        1.774246        1.720556        
1.699652        1.621962        1.677344        1.68416 1.676578        
1.547416        miR-200a-3p
Papola  6797758 8.153662        8.565207        8.020898        8.518664        
8.505116        7.943658        8.357664        8.240752        8.335328        
8.073493        ÊmiR-122-5p
Papola  6797758 8.153662        8.565207        8.020898        8.518664        
8.505116        7.943658        8.357664        8.240752        8.335328        
8.073493        miR-155-5p
Pea15a  6764133 4.964034        5.971928        4.699665        5.022268        
4.42346 3.504455        3.885413        4.29762 4.703796        4.36904 
miR-155-5p
Pea15a  6764133 4.964034        5.971928        4.699665        5.022268        
4.42346 3.504455        3.885413        4.29762 4.703796        4.36904 
miR-200a-3p
Pfkfb2  6762106 4.922378        5.122215        4.861716        5.642483        
5.563247        5.167768        5.439123        4.952079        5.303319        
5.064548        miR-200a-3p
Pik3cb  6998192 5.309455        5.36556 4.71353 5.580882        4.95052 
4.771436        5.082135        5.097848        5.313567        5.031688        
miR-200a-3p
Plekhm1 6791729 4.746829        4.954201        4.825105        5.021305        
4.836846        4.560595        4.719624        4.672835        4.812749        
4.711748        miR-155-5p
Pogk    6763853 2.711247        2.658373        3.061944        3.149579        
3.149937        2.822685        2.944064        2.992957        2.933799        
2.864191        miR-200a-3p
Pot1a   6952231 2.640684        2.799699        2.352146        3.248857        
2.406283        2.405812        2.246156        2.559814        3.245737        
2.424595        miR-200a-3p
Ppip5k1 6890382 2.317155        2.42774 2.3556  2.299412        2.270737        
2.163709        2.142812        2.283447        2.325489        2.229519        
ÊmiR-122-5p
Ppm1l   6898276 4.263616        4.477439        4.616855        4.450671        
4.538463        4.444541        4.822915        4.458615        4.568552        
4.376452        miR-200a-3p
Ppp2r2a 6825511 4.112834        4.28752 4.123154        4.788586        
4.407648        3.961656        4.301158        4.296441        4.518684        
4.174381        miR-200a-3p
Ppt2    6855041 5.995327        5.822593        6.362639        6.072184        
5.72406 6.058456        6.401286        6.260744        6.190649        
6.461071        miR-200a-3p
Prkce   6852820 3.767464        3.863174        3.600337        3.967598        
4.191873        4.01545 4.147309        4.172636        4.260505        
4.165256        miR-200a-3p
Pskh1   6978872 6.631743        6.713861        6.598451        6.665084        
6.673113        6.751545        6.876313        6.530297        6.792205        
7.013042        miR-155-5p
Rassf3  6777583 5.910885        5.784537        5.664333        5.823383        
5.582536        5.851732        5.788298        5.76044 5.800698        
5.785448        miR-200a-3p
Riok3   6858892 6.568821        6.567361        6.457566        7.152487        
6.734436        6.63034 6.997694        6.784703        6.961487        6.71218 
miR-200a-3p
Rps6ka3 7014815 4.785018        5.496536        4.328071        5.407094        
4.691785        3.836043        4.078505        4.504457        4.870632        
4.114029        miR-155-5p
Rreb1   6806271 5.445652        5.645881        5.718656        5.501119        
5.483599        5.406824        5.659266        5.646255        6.047409        
5.883234        miR-155-5p
Ruvbl1  6762679 3.592658        3.627016        3.17335 3.644224        
3.282309        3.197497        3.791998        3.959576        3.649392        
3.921814        miR-200a-3p
Sass6   6900713 1.785463        1.789748        1.930153        1.903548        
1.873289        1.607495        1.778229        1.816979        1.835371        
1.827893        miR-155-5p
Satb1   6855981 1.708573        1.94421 2.077243        1.851964        
2.019687        1.824076        1.86469 1.938801        1.873859        
1.576652        miR-155-5p
Scn1a   6887327 1.317338        1.319913        1.286386        1.181643        
1.28391 1.216389        1.251893        1.191737        1.182665        
1.133387        miR-155-5p
Sestd1  6888011 2.015559        2.723024        2.350356        2.987603        
2.212484        1.905612        1.640018        1.820913        2.036415        
2.014736        miR-200a-3p
set-07  6987580 6.468317        6.79587 6.19521 6.817775        6.445917        
5.603401        5.790857        6.897143        6.706453        6.223103        
miR-200a-3p
set-11  6932517 6.860589        7.345136        6.386377        6.251645        
6.655027        5.647351        6.226913        6.180613        6.490996        
6.323108        miR-200a-3p
set-11  6932517 6.860589        7.345136        6.386377        6.251645        
6.655027        5.647351        6.226913        6.180613        6.490996        
6.323108        miR-155-5p
Siah1a  6983978 5.231003        5.289343        5.334669        5.436797        
5.508791        5.619435        5.572198        4.908194        5.262063        
5.496702        miR-200a-3p
Skint10 6924588 1.042856        1.323591        1.171352        1.170994        
1.090002        1.058034        1.023705        1.01499 1.067952        
1.306606        miR-200a-3p
Slc15a1 6827924 1.409971        1.404152        1.467204        1.310959        
1.401881        1.527479        1.546141        1.33614 1.363613        
1.515351        ÊmiR-122-5p
Slc25a34        6926463 2.219532        2.284435        2.19583 2.131202        
2.199219        2.254236        2.323434        2.157297        2.122005        
2.247743        ÊmiR-122-5p
Slc38a4 6838287 11.35858        11.37838        11.32224        11.71685        
11.06332        11.27172        11.2184 11.20555        11.20778        
11.12652        miR-155-5p
Slc6a14 7010390 1.339161        1.267886        1.222515        1.293102        
1.293102        1.40862 1.330181        1.209085        1.303204        
1.244543        miR-200a-3p
Smad5   6807345 5.145695        5.131076        4.926905        5.445472        
5.174634        4.941167        5.068683        5.25298 5.316321        5.37717 
miR-155-5p
Snx18   6816183 5.878328        6.216551        5.798337        6.167968        
6.103137        5.830638        5.914927        5.878478        6.296112        
5.976593        miR-200a-3p
Sobp    6773582 3.241426        3.131065        3.154666        3.070593        
3.21442 3.156404        3.225482        2.942181        2.976839        
3.115761        miR-200a-3p
Socs1   6843913 4.843292        4.422616        4.77537 4.588798        
4.673558        4.460293        5.05519 4.515873        4.571465        
4.403606        miR-155-5p
Sox6    6970735 4.011547        3.616983        3.629426        3.708112        
3.958967        3.653736        4.040705        3.978344        3.992907        
3.664066        ÊmiR-122-5p
Spag9   6783640 6.106643        6.326154        5.868537        6.673448        
6.177495        5.638489        6.011662        6.191454        6.290779        
5.943479        miR-200a-3p
Spef1   6890986 2.203998        2.048951        2.35089 2.144843        
2.280669        2.158904        2.127666        2.282905        2.136764        
2.284235        ÊmiR-122-5p
Src     6882670 2.739238        3.196628        2.816065        2.803374        
3.032561        2.667826        2.612624        2.615007        2.635582        
2.451282        miR-200a-3p
Stat5b  6791444 5.752618        5.312339        5.466794        6.15099 
5.732331        5.261409        4.945253        6.396879        6.357685        
5.709451        miR-200a-3p
Stk35   6881146 5.433441        5.659903        5.671883        5.601674        
5.905615        5.818621        5.923793        5.279574        5.25105 
5.353739        miR-200a-3p
Sypl    6794307 5.777671        5.933701        5.87721 5.960294        
5.859209        5.681154        5.806756        6.116921        5.909642        
5.821836        miR-155-5p
Syt7    6868032 2.28083 2.117912        2.163811        2.079271        
2.131968        2.236999        2.004172        2.158557        2.028318        
2.18801 ÊmiR-122-5p
Taf12   6917489 5.260716        5.715058        5.289896        5.41051 
5.763583        5.229777        5.266072        5.361431        5.744344        
5.439184        miR-200a-3p
Tcf7l2  6870580 4.454851        4.250305        4.311698        4.293491        
4.191747        4.115787        4.307928        4.766744        4.676902        
4.416157        miR-155-5p
Tgif1   6857022 4.216288        3.994723        3.991719        4.387767        
4.201958        3.852363        3.478607        4.048971        4.359118        
4.103215        ÊmiR-122-5p
Tial1   6971446 5.182669        5.109607        5.17441 5.790406        
5.265777        5.28969 5.201899        5.185026        5.363356        
5.153164        miR-200a-3p
Tle4    6871700 4.296235        4.427185        4.21915 4.642778        
4.244484        4.081908        4.329391        4.217289        4.375704        
4.249302        miR-155-5p
Tmed5   6940883 7.167882        7.259885        7.13076 8.25049 7.199199        
6.82243 7.024137        6.858376        7.034499        6.61907 miR-200a-3p
Tmem126a        6969289 8.784485        8.924273        8.752684        
8.443294        8.765006        8.960153        8.825488        8.676274        
8.791369        8.981134        ÊmiR-122-5p
Tmem150c        6940333 2.318827        2.323515        2.110954        
2.347969        2.267759        2.437349        2.263509        2.344942        
2.161779        2.219424        ÊmiR-122-5p
Tmem178 6852542 3.119604        4.186162        2.501763        3.200142        
2.727012        2.373857        1.981679        1.945479        2.123554        
2.129455        miR-155-5p
Tmem185b        6752497 5.259358        5.503834        5.194186        
5.424166        5.108308        5.3919  5.22403 5.257045        5.256265        
5.499859        miR-200a-3p
Tmem194 6771578 2.420532        2.868657        2.954296        3.041671        
2.523378        2.58661 2.704776        2.83587 2.768405        2.799899        
miR-200a-3p
Trip12  6760296 6.880208        7.067605        6.589384        7.52759 
6.913135        6.680269        6.94279 7.092388        7.172106        
6.881572        miR-155-5p
Trove2  6762773 2.440647        2.888207        2.543777        3.532198        
2.884312        2.223219        2.192584        2.609225        2.666667        
2.275456        miR-200a-3p
Trp53inp1       6911679 6.957933        7.736714        6.985158        
10.63549        8.442145        6.407501        7.225498        6.923096        
6.70865 6.49372 miR-200a-3p
Trp53inp1       6911679 6.957933        7.736714        6.985158        
10.63549        8.442145        6.407501        7.225498        6.923096        
6.70865 6.49372 miR-155-5p
Trp63   6840223 2.038133        1.914053        2.070846        1.934529        
2.042464        2.011847        2.065076        2.061642        2.00647 
2.171616        miR-200a-3p
Trpc4   6897556 1.711568        1.506674        1.649482        1.51594 
1.536048        1.600839        1.523953        1.721696        1.520773        
1.552806        miR-155-5p
Ttc39b  6922901 5.734196        5.566844        5.624419        5.313667        
5.126054        6.279069        6.386874        5.73643 5.683022        
6.382421        miR-200a-3p
Ttc39b  6922895 5.050344        4.148453        4.790901        4.320287        
4.366146        5.615169        5.546158        4.887526        4.716304        
5.706808        miR-200a-3p
Ube3a   6960931 5.772857        5.87815 5.81648 6.924622        5.901788        
5.768672        5.857977        6.028826        6.20781 5.977476        
miR-200a-3p
Ubl4    7017627 5.948778        6.002257        5.599577        5.697495        
5.562109        5.847445        6.004865        5.483383        5.689515        
5.703135        miR-155-5p
Vamp4   6754604 3.924914        4.230151        3.484666        4.33477 
3.660663        3.658799        3.737889        3.970613        4.149849        
3.63746 miR-200a-3p
Whsc1   4378015 1.486846        2.057945        2.82297 2.145431        
3.096776        2.617174        1.747331        1.703774        1.353096        
1.425059        miR-200a-3p
Wrb     6843487 4.835119        4.992678        4.88869 4.812959        
4.669662        5.110192        4.786012        4.947437        5.174735        
5.344423        miR-200a-3p
Zbtb41  6753591 5.523348        5.992021        5.729559        6.196527        
6.101086        5.436884        5.95039 6.069551        6.207835        
6.366302        ÊmiR-122-5p
Zdhhc20 6824980 5.123672        5.41871 5.060263        5.764211        
5.163641        4.896914        5.202577        5.43108 5.541977        
5.128915        miR-155-5p
Zeb2    6886356 6.695102        7.306243        6.556614        6.274015        
6.031636        5.243945        5.469865        5.752083        6.329485        
5.639054        miR-200a-3p
Zfp282  6945957 3.086275        3.115763        3.323263        3.375669        
3.264165        3.291953        3.440094        3.621118        3.103847        
3.162907        ÊmiR-122-5p
Zfp334  6892997 1.988576        2.114274        2.104099        2.346411        
2.360285        2.023622        1.896402        2.022869        1.872741        
2.215996        miR-200a-3p
Zfp46   6917817 2.042088        2.381228        2.201173        2.477364        
2.16874 2.148733        2.172664        2.189835        2.270157        
2.525024        ÊmiR-122-5p
Zfp516  6862627 1.905651        2.047092        2.050629        2.564821        
2.880054        1.831327        2.342319        1.881035        1.918686        
1.879574        miR-200a-3p
Zfp592  6962043 5.382038        5.430735        5.532358        6.198174        
5.797382        5.495779        5.662926        5.751993        5.509037        
5.802926        miR-200a-3p
Zfp644  6940792 5.24061 5.303612        4.810661        6.010238        
5.180829        4.340858        4.685591        5.276744        5.451241        
4.628565        miR-200a-3p
Zfp644  6940792 5.24061 5.303612        4.810661        6.010238        
5.180829        4.340858        4.685591        5.276744        5.451241        
4.628565        miR-155-5p
Zfp652  6783762 4.955848        4.898529        5.037427        5.033914        
5.219   4.593605        5.155224        5.38681 5.149092        5.280637        
miR-155-5p
Zfp652  6783761 5.418314        5.337665        5.491954        5.331684        
5.59938 5.429139        5.027226        5.425941        5.106269        
4.270379        miR-155-5p
Zfp689  6971359 2.139426        1.993615        2.033257        2.141765        
1.935828        1.924087        2.175277        1.930476        2.066629        
2.02841 ÊmiR-122-5p
Zfp704  6903129 2.152641        2.370465        2.371949        2.300536        
2.244641        2.208719        2.31065 2.174697        2.270977        2.08824 
miR-155-5p
Zfp846  6987324 2.264386        3.052588        2.717574        2.981956        
3.503247        2.98225 2.65839 2.986335        3.445039        2.681562        
miR-200a-3p
Zswim6  6815853 2.389492        3.224784        2.379994        3.084472        
2.49864 2.201475        2.24598 1.965208        2.878276        1.78403 
miR-155-5p
______________________________________________
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Reply via email to