Hello again, I might be repeating myself here, so my apologies, but do I have to run a script file from my R Studio to reimplement my previous work for a given project.... so to start up where I left off.... or is opening up R and, with my global environment automatically reloading as it was when I last worked on, sufficient?
Best, Spencer On Wed, Jul 3, 2019 at 8:44 PM Spencer Brackett < spbracket...@saintjosephhs.com> wrote: > Very interesting.... I will have to take a look. Thank you very much for > the reference to these resources! They will be of great help to me. > > Many thanks, > > Spencer > > On Wed, Jul 3, 2019 at 8:41 PM Jeff Newmiller <jdnew...@dcn.davis.ca.us> > wrote: > >> An R file is nothing more than a text file with an R extension instead of >> a TXT extension. Use any text editor you like to rearrange your commands in >> the order you want and remove false starts (beware of Notepad... it seems >> to have a tendency to tack on a .txt extension in addition to the .R >> extension of you are not careful). >> >> If you use an R development tool like ESS or RStudio or Notepad++ with >> the R extension, you can type all of your commands into the file editing >> window first and you can use a hot key to copy them to your R console. That >> way you make a file and test your commands as you write them, all at once. >> >> On July 3, 2019 5:27:37 PM PDT, Spencer Brackett < >> spbracket...@saintjosephhs.com> wrote: >> >I do have a script available, though it is not in a traditional R >> >script >> >file/document, but an .Rhistory file as well as on Notepad. Is there a >> >way >> >I can convert one or both of these file types into an R script file so >> >that >> >I can run the commands directly to my console? >> > >> >Best, >> > >> >Spencer >> > >> >On Wed, Jul 3, 2019 at 8:18 PM Jeff Newmiller >> ><jdnew...@dcn.davis.ca.us> >> >wrote: >> > >> >> Saving/loading does not affect the status of packages being loaded or >> >not, >> >> which may affect how useful those objects are. This is why I depend >> >on >> >> having a script that can reproduce my results at all times, and only >> >use >> >> the load/save feature to minimize the number of times I have to re-do >> >long >> >> recalculations. >> >> >> >> On July 3, 2019 2:59:44 PM PDT, Spencer Brackett < >> >> spbracket...@saintjosephhs.com> wrote: >> >> >Good evening, >> >> > >> >> >I tried loading an R global environment that I had saved so to >> >resume >> >> >my >> >> >work on the datasets I manipulated during that particular R session. >> >> >After >> >> >loading the file directly, the same items that were contained in the >> >> >original working environment from the previous session appeared to >> >be >> >> >successfully implemented in my new environment. I used the ls() >> >command >> >> >to >> >> >ensure that the data I had loaded through my main console was >> >present >> >> >and >> >> >properly formatted (as it appears to be) in the environment. >> >> > >> >> >This is the result... >> >> > >> >> >> ls() >> >> >[1] "anno" >> >> >[2] "cnames" >> >> >[3] "GBM_protein_expression" >> >> >[4] "mapper" >> >> >[5] "meth" >> >> >[6] "protein_expression.LGG.US.(1).tsv" >> >> >[7] "stringAsFactors" >> >> >[8] "vec" >> >> > >> >> >I was expecting an object/file name of some sort to appear given >> >that I >> >> >had loaded two datasets in this previous R session, manipulating >> >them >> >> >in a >> >> >manner that resulted in the above output. Does this output >> >illustrate >> >> >that >> >> >the data I worked with in the previous R session, with its cosmetic >> >> >alterations and all, are all now loaded within this session? In >> >other >> >> >words, has my previous work been restored? I wanted to make sure >> >> >somehow as >> >> >I would like to manipulate the data further. >> >> > >> >> >Best, >> >> > >> >> >Spencer >> >> > >> >> > [[alternative HTML version deleted]] >> >> > >> >> >______________________________________________ >> >> >R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see >> >> >https://stat.ethz.ch/mailman/listinfo/r-help >> >> >PLEASE do read the posting guide >> >> >http://www.R-project.org/posting-guide.html >> >> >and provide commented, minimal, self-contained, reproducible code. >> >> >> >> -- >> >> Sent from my phone. Please excuse my brevity. >> >> >> >> -- >> Sent from my phone. Please excuse my brevity. >> > [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.