Good evening,
I am attempting to load the following Xena dataset
https://tcga.xenahubs.net/download/TCGA.GBMLGG.sampleMap/HumanMethylation450.gz
I am trying to unpack the dataset and read it into R as a table, but due to
the size of the file, I am having some trouble. The following are the
commands I have tried thus far.
HumanMethylation450 <- fread("
https://tcga.xenahubs.net/download/TCGA.GBMLGG.sampleMap/HumanMethylation450.gz
")
readLines("
https://tcga.xenahubs.net/download/TCGA.GBMLGG.sampleMap/HumanMethylation450.gz
")
###These two above attempts failed with warning messages
from R###
Methyl <-read.delim("
https://tcga.xenahubs.net/download/TCGA.GBMLGG.sampleMap/HumanMethylation450.gz
")
##This attempt is still processing, but has been doing so
for quite some time##
Any ideas as to what else I could try?
Best,
Spencer
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