Hello, I have a dataframe in R that looks like the following
cluster id period u_3 timeID startTrt Ijt error y 1: 1 1 0 -1.26 1 1 0 1.2015 17.809 2: 1 2 0 -1.26 1 1 0 -1.6577 14.950 3: 1 3 0 -1.26 1 1 0 -3.8639 12.744 4: 1 4 0 -1.26 1 1 0 1.4978 18.105 5: 1 5 0 -1.26 1 1 0 -5.3182 11.289 When I try to run a gee model on it using the geesmv package which adjusts the variance covariance matrix for small sample sizes as follows test <- GEE.var.fg(y ~ factor(period) + factor(Ijt),id="id",family=gaussian, dx,corstr="exchangeable") I get this error message: Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27 running glm to get initial regression estimate (Intercept) factor(period)1 factor(period)2 factor(period)3 factor(period)4 factor(period)5 factor(Ijt)1 17.25 -8.27 -6.47 -9.13 -8.17 -11.89 8.96 Error in gee.fit$working.correlation[1, 2] : subscript out of bounds I think the usual culprit for this kind of error message is that the variable being referred to (id in this case I assume) is non-existent. That is clearly not the case here and I checked to make sure it is it not a typo. Does anyone know why this is? How would I troubleshoot this? Thank you, Edward [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.