Hi, thanks, I posted in the Posit community.
Sigbert Am 15.07.24 um 16:41 schrieb Bert Gunter:
Have you tried https://rstudio.github.io/reticulate/ ? Generally speaking, complex nonstandard package specific questions such as yours rarely get a reply here -- there are 20,000+ packages (and counting) after all! As reticulate was created by and integrated with RStudio/Posit, I would think their site and help resources might be a better venue. Of course, if you don't use RStudio, you may have no joy there either. Cheers, Bert On Sun, Jul 14, 2024 at 10:56 PM Sigbert Klinke <sigb...@wiwi.hu-berlin.de> wrote:Hi, I am using reticulate and a virtual environment (not conda) to run Python scripts from RStudio. However, when I try to use my own (existing) virtual environment, reticulate does not use it. If I run my scripts, the installed modules (e.g., py_install("pandas", "mmstat4.hu.data")) are not found. I believe this happens because reticulate is using r-reticulate instead of mmstat4.hu.data. How can I force reticulate to use my virtual environment? Thanks Sigbert > library("reticulate") > py_config() python: /home/sk/.virtualenvs/r-reticulate/bin/python libpython: /usr/lib/python3.10/config-3.10-x86_64-linux-gnu/libpython3.10.so pythonhome: /home/sk/.virtualenvs/r-reticulate:/home/sk/.virtualenvs/r-reticulate version: 3.10.12 (main, Mar 22 2024, 16:50:05) [GCC 11.4.0] numpy: /home/sk/.virtualenvs/r-reticulate/lib/python3.10/site-packages/numpy numpy_version: 2.0.0 > use_virtualenv("mmstat4.hu.data", required = TRUE) > py_config() python: /home/sk/.virtualenvs/r-reticulate/bin/python libpython: /usr/lib/python3.10/config-3.10-x86_64-linux-gnu/libpython3.10.so pythonhome: /home/sk/.virtualenvs/r-reticulate:/home/sk/.virtualenvs/r-reticulate version: 3.10.12 (main, Mar 22 2024, 16:50:05) [GCC 11.4.0] numpy: /home/sk/.virtualenvs/r-reticulate/lib/python3.10/site-packages/numpy numpy_version: 2.0.0 -- https://hu.berlin/sk https://hu.berlin/mmstat ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
-- https://hu.berlin/sk https://hu.berlin/mmstat ______________________________________________ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
