Chuck Cleland wrote:
On 10/22/2008 6:05 AM, Tobias Erik Reiners wrote:
Dear Helpers,

I tries to find an Package or script which deals with Nagelkerke R square.
I got Prediction data from Habitatmodels for an animal. Some researchers
use the the Nagelkerke R Square to confirm the Goodness of model. I
would like to do this as well.
Data:
1  0.9847
1  0,7653
...
0  0,2456
0  0,0457
...

THanks a lot

RSiteSearch("Nagelkerke", restrict="function")

  suggests lrm() in the Design package by Frank Harrell.


Thanks Chuck, and note Tobias that no R^2 measures goodness of fit but rather explained variation or predictive discrimination. R^2 can be high and there be a major misspecification in the model (e.g., omitting an interaction or nonlinearity term or omitting an important variable).

Frank


--
Frank E Harrell Jr   Professor and Chair           School of Medicine
                     Department of Biostatistics   Vanderbilt University

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